RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
UBR1-202ENST00000546274 MSMPQ1L6U9 139 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 C12orf74Q32Q52 190 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 OR1L8Q8NGR8 309 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 ZNF414Q96IQ9 312 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 IFI27L2Q9H2X8 130 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 MAP1LC3AQ9H492 121 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 RAB9BQ9NP90 201 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 TMEM167BQ9NRX6 74 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 DKK2Q9UBU2 259 aa6.31□□□□□ -1.4
UBR1-202ENST00000546274 EP300Q09472 2414 aaPredicted RBP6.31□□□□□ -1.4
UBR1-202ENST00000546274 TRAV4A0A0B4J268 109 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 LOC107984156A0A0G2JMH3 177 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 SNCGO76070 127 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 IGHG3P01860 377 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 PSMB2P49721 201 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 FOXC1Q12948 553 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 SPRNQ5BIV9 151 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 MOGAT3Q86VF5 341 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 ARL17AQ8IVW1 177 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 CEND1Q8N111 149 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 BOD1L1Q8NFC6 3051 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 LAMA5O15230 3695 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 TIMM8AO60220 97 aaPredicted RBP6.3□□□□□ -1.4
UBR1-202ENST00000546274 IGLV1-44P01699 117 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 PRDX2P32119 198 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 EDDM3AQ14507 147 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 C9orf106Q8NAJ2 232 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 TCF19Q9Y242 345 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 AMMECR1Q9Y4X0 333 aaPredicted RBP6.3□□□□□ -1.4
UBR1-202ENST00000546274 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
UBR1-202ENST00000546274 RHODO00212 210 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 SPINT2O43291 252 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 IGHV3-13P01766 116 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 ATP5L2Q7Z4Y8 100 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 CARD19Q96LW7 228 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 FAM234AQ9H0X4 552 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 DKK4Q9UBT3 224 aa6.3□□□□□ -1.4
UBR1-202ENST00000546274 TRBV25-1A0A075B6N4 114 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 TRAV25A0A0B4J276 109 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 IGHV1-18A0A0C4DH31 117 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
UBR1-202ENST00000546274 CNEP1R1Q8N9A8 125 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 INTS1Q8N201 2190 aaKnown RBP6.29□□□□□ -1.4
UBR1-202ENST00000546274 SRRM5B3KS81 715 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 CRLF1O75462 422 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 GNG5P63218 68 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 RRN3P1Q2M238 152 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 C1orf162Q8NEQ5 155 aaPredicted RBP6.29□□□□□ -1.4
UBR1-202ENST00000546274 PPDPFLQ8WWR9 84 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 ZNF503Q96F45 646 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 TPPP3Q9BW30 176 aa6.29□□□□□ -1.4
UBR1-202ENST00000546274 PTPRZ1P23471 2315 aaPredicted RBP6.29□□□□□ -1.4
UBR1-202ENST00000546274 TRGV8A0A0C4DH27 118 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 CGB3P0DN86 165 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 CGB7P0DN87 165 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 UBE2L3P68036 154 aaKnown RBP6.28□□□□□ -1.4
UBR1-202ENST00000546274 GTSCR1Q86UQ5 136 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 HIST1H4GQ99525 98 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 NABP2Q9BQ15 211 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 IGHV3OR15-7A0A075B7D8 119 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 CFAP126Q5VTH2 177 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 Q6ZQT7 251 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 ZNRF1Q8ND25 227 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 LEAP2Q969E1 77 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 FBXL15Q9H469 300 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 GNG12Q9UBI6 72 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 CENPVL3A0A0U1RRI6 287 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 C15orf61A6NNL5 157 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 FCN3O75636 299 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 ZNF688P0C7X2 276 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 LGALS9BQ3B8N2 356 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 LGALS9CQ6DKI2 356 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 NRGNQ92686 78 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 SCNM1Q9BWG6 230 aa6.28□□□□□ -1.4
UBR1-202ENST00000546274 SMIM9A6NGZ8 99 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 P01737 135 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 MYOD1P15172 320 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 C17orf58Q2M2W7 97 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 LINC00322Q6ZN03 302 aaPredicted RBP6.27□□□□□ -1.41
UBR1-202ENST00000546274 MOB3BQ86TA1 216 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 TMEM14BQ9NUH8 114 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PCNX2A6NKB5 2137 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 CEP250Q9BV73 2442 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 TRAV8-2A0A0B4J237 113 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PYYP10082 97 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 SRD5A1P18405 259 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PRR20EP86478 221 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PRR20CP86479 221 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PRR20DP86480 221 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PRR20BP86481 221 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 PRR20AP86496 221 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 FAM231DQ6ZW35 169 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 RPP21Q9H633 154 aaKnown RBP6.27□□□□□ -1.41
UBR1-202ENST00000546274 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 LHBP01229 141 aa6.27□□□□□ -1.41
UBR1-202ENST00000546274 SAA2P0DJI9 122 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms