RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 EPM2AB3EWF7 344 aa11.49□□□□□ -0.57
CPSF7-225ENST00000545934 H7BYZ3 331 aa11.49□□□□□ -0.57
CPSF7-225ENST00000545934 OR5I1Q13606 314 aa11.49□□□□□ -0.57
CPSF7-225ENST00000545934 RSL24D1Q9UHA3 163 aaKnown RBP11.49□□□□□ -0.57
CPSF7-225ENST00000545934 PMS2P5A8MQ11 134 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 H3BP45 60 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 HYPMO75409 117 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 IL5P05113 134 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 RAP2BP61225 183 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 KIR3DS1Q14943 382 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 SPANXN5Q5MJ07 72 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 PPP1R14DQ9NXH3 145 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 ZNF586Q9NXT0 402 aa11.48□□□□□ -0.57
CPSF7-225ENST00000545934 A0A0J9YY99 117 aa11.47□□□□□ -0.57
CPSF7-225ENST00000545934 ADAP1O75689 374 aa11.47□□□□□ -0.57
CPSF7-225ENST00000545934 LINC00869P0C866 280 aa11.47□□□□□ -0.57
CPSF7-225ENST00000545934 PRB4P10163 310 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-225ENST00000545934 PATE2Q6UY27 113 aa11.47□□□□□ -0.57
CPSF7-225ENST00000545934 TMED4Q7Z7H5 227 aa11.47□□□□□ -0.57
CPSF7-225ENST00000545934 DYNC2LI1Q8TCX1 351 aa11.47□□□□□ -0.57
CPSF7-225ENST00000545934 RPUSD4Q96CM3 377 aaKnown RBP11.47□□□□□ -0.57
CPSF7-225ENST00000545934 CCDC59Q9P031 241 aaKnown RBP11.47□□□□□ -0.57
CPSF7-225ENST00000545934 STRAPQ9Y3F4 350 aaKnown RBP11.47□□□□□ -0.57
CPSF7-225ENST00000545934 K7EPK0 472 aa11.46□□□□□ -0.57
CPSF7-225ENST00000545934 CXCL2P19875 107 aa11.46□□□□□ -0.57
CPSF7-225ENST00000545934 LINC00315P59091 139 aa11.46□□□□□ -0.57
CPSF7-225ENST00000545934 SELENOTP62341 195 aa11.46□□□□□ -0.57
CPSF7-225ENST00000545934 GFI1BQ5VTD9 330 aa11.46□□□□□ -0.57
CPSF7-225ENST00000545934 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.57
CPSF7-225ENST00000545934 ZNF331Q9NQX6 463 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-225ENST00000545934 MYCBP2O75592 4640 aa11.46□□□□□ -0.58
CPSF7-225ENST00000545934 GAGE12BA1L429 117 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 GAGE7O76087 117 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 SFT2D2O95562 160 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 OR5G3P0C626 314 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 GAGE12FP0CL80 117 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 GAGE12GP0CL81 117 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 GAGE12IP0CL82 117 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 VAMP1P23763 118 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 XGP55808 180 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 DLK1P80370 383 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 ID3Q02535 119 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 TRIM63Q969Q1 353 aa11.45□□□□□ -0.58
CPSF7-225ENST00000545934 PARD6GQ9BYG4 376 aaPredicted RBP11.45□□□□□ -0.58
CPSF7-225ENST00000545934 RLN2P04090 185 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 INAFM2P0DMQ5 153 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 PPP1R1AQ13522 171 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 C4orf46Q504U0 113 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 ZBTB8BQ8NAP8 495 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-225ENST00000545934 LRRC20Q8TCA0 184 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 VSIG2Q96IQ7 327 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 SLC50A1Q9BRV3 221 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 TMPRSS5Q9H3S3 457 aa11.44□□□□□ -0.58
CPSF7-225ENST00000545934 A0A096LPF7 62 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 HOXB5P09067 269 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 TNFSF8P32971 234 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 FAUP35544 74 aaKnown RBP11.43□□□□□ -0.58
CPSF7-225ENST00000545934 DAZ2Q13117 558 aaKnown RBP11.43□□□□□ -0.58
CPSF7-225ENST00000545934 LCN15Q6UWW0 184 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 CCDC28AQ8IWP9 274 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 C18orf15Q96N68 181 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 ARL6Q9H0F7 186 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 ARV1Q9H2C2 271 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 PGPEP1Q9NXJ5 209 aa11.43□□□□□ -0.58
CPSF7-225ENST00000545934 FABP12A6NFH5 140 aa11.42□□□□□ -0.58
CPSF7-225ENST00000545934 SNURFLB1AK76 121 aa11.42□□□□□ -0.58
CPSF7-225ENST00000545934 FNDC10F2Z333 226 aa11.42□□□□□ -0.58
CPSF7-225ENST00000545934 CCNKO75909 580 aa11.42□□□□□ -0.58
CPSF7-225ENST00000545934 POLR2GP62487 172 aaKnown RBP eCLIP11.42□□□□□ -0.58
CPSF7-225ENST00000545934 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
CPSF7-225ENST00000545934 SLC25A21Q9BQT8 299 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-225ENST00000545934 SLIRPQ9GZT3 109 aaKnown RBP11.42□□□□□ -0.58
CPSF7-225ENST00000545934 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
CPSF7-225ENST00000545934 RNF24Q9Y225 148 aa11.42□□□□□ -0.58
CPSF7-225ENST00000545934 DMBT1Q9UGM3 2413 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-225ENST00000545934 PXDC1Q5TGL8 231 aa11.41□□□□□ -0.58
CPSF7-225ENST00000545934 CDPF1Q6NVV7 123 aa11.41□□□□□ -0.58
CPSF7-225ENST00000545934 Q6ZTI0 123 aa11.41□□□□□ -0.58
CPSF7-225ENST00000545934 SMIM8Q96KF7 97 aa11.41□□□□□ -0.58
CPSF7-225ENST00000545934 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
CPSF7-225ENST00000545934 PSENENQ9NZ42 101 aa11.41□□□□□ -0.58
CPSF7-225ENST00000545934 SLC17A3O00476 420 aa11.4□□□□□ -0.58
CPSF7-225ENST00000545934 IGLC2P0DOY2 106 aa11.4□□□□□ -0.58
CPSF7-225ENST00000545934 ANXA7P20073 488 aaKnown RBP11.4□□□□□ -0.58
CPSF7-225ENST00000545934 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPSF7-225ENST00000545934 TEPPQ6URK8 271 aa11.4□□□□□ -0.58
CPSF7-225ENST00000545934 CCDC190Q86UF4 302 aa11.4□□□□□ -0.58
CPSF7-225ENST00000545934 RAB2BQ8WUD1 216 aa11.4□□□□□ -0.58
CPSF7-225ENST00000545934 SAT2Q96F10 170 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-225ENST00000545934 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
CPSF7-225ENST00000545934 MRPS26Q9BYN8 205 aaKnown RBP11.4□□□□□ -0.58
CPSF7-225ENST00000545934 LINC00854A0A1B0GVQ3 168 aa11.39□□□□□ -0.59
CPSF7-225ENST00000545934 SIVA1O15304 175 aa11.39□□□□□ -0.59
CPSF7-225ENST00000545934 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
CPSF7-225ENST00000545934 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
CPSF7-225ENST00000545934 RRAS2P62070 204 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-225ENST00000545934 SLC38A11Q08AI6 406 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms