RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 ACTL10Q5JWF8 245 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 SPATA31B1PQ5VZV4 182 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 CST9LP1Q5W188 147 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 AMTNQ6UX39 209 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 SIGLEC15Q6ZMC9 328 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 Q6ZQT7 251 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 ZNF431Q8TF32 576 aaPredicted RBP4.51□□□□□ -1.69
LDHC-209ENST00000545848 METTL26Q96S19 204 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 RAB40CQ96S21 281 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 TRGV9Q99603 122 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 PSENENQ9NZ42 101 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 MBD2Q9UBB5 411 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 LSM5Q9Y4Y9 91 aaKnown RBP4.51□□□□□ -1.69
LDHC-209ENST00000545848 U3KQ87 197 aa4.51□□□□□ -1.69
LDHC-209ENST00000545848 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 PRAC2D3DTV9 90 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 H3BMM0 161 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 DEDDO75618 318 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 ATG12O94817 140 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 GPX4P36969 197 aaPredicted RBP4.5□□□□□ -1.69
LDHC-209ENST00000545848 TAGLN2P37802 199 aaKnown RBP4.5□□□□□ -1.69
LDHC-209ENST00000545848 EIF2B2P49770 351 aaKnown RBP4.5□□□□□ -1.69
LDHC-209ENST00000545848 SUB1P53999 127 aaKnown RBP eCLIP4.5□□□□□ -1.69
LDHC-209ENST00000545848 Q5BKY6 102 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 MIC13Q5XKP0 118 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 CYP2G1PQ6ZSU1 146 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 RPP25LQ8N5L8 163 aaKnown RBP4.5□□□□□ -1.69
LDHC-209ENST00000545848 BPIFCQ8NFQ6 507 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 DEDD2Q8WXF8 326 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 TMEM37Q8WXS4 190 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 SLC35E1Q96K37 410 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 SMIM8Q96KF7 97 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 SCGB3A2Q96PL1 93 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 GINS3Q9BRX5 216 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 CCDC32Q9BV29 185 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 SLC25A22Q9H936 323 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 GSKIPQ9P0R6 139 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 CBY1Q9Y3M2 126 aa4.5□□□□□ -1.69
LDHC-209ENST00000545848 TRAV2A0A0B4J234 112 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 SMCO3A2RU48 225 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 C5orf51A6NDU8 294 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 HELTA6NFD8 242 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 ZNF98A6NK75 572 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 A8MTW9 85 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 G3V3Q6 166 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 H3BQ15 152 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 GOSR2O14653 212 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 CYB5BO43169 146 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 CRXO43186 299 aaPredicted RBP4.49□□□□□ -1.69
LDHC-209ENST00000545848 JTBO76095 146 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 STAG3L3P0CL85 134 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 ANXA3P12429 323 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 ORM2P19652 201 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 CXCL3P19876 107 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 B2MP61769 119 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 AKR1C1Q04828 323 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 LAMTOR1Q6IAA8 161 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 Q6ZWC4 215 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 TMEM144Q7Z5S9 345 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 C1orf158Q8N1D5 194 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 C12orf45Q8N5I9 185 aaPredicted RBP4.49□□□□□ -1.69
LDHC-209ENST00000545848 TMEM217Q8N7C4 229 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 OR1B1Q8NGR6 318 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 OR11H2Q8NH07 326 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 COQ8AQ8NI60 647 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 Q8WTZ3 238 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 RPL36ALQ969Q0 106 aaKnown RBP4.49□□□□□ -1.69
LDHC-209ENST00000545848 C7orf50Q9BRJ6 194 aaKnown RBP4.49□□□□□ -1.69
LDHC-209ENST00000545848 RNF126Q9BV68 326 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 SLC25A39Q9BZJ4 359 aaPredicted RBP4.49□□□□□ -1.69
LDHC-209ENST00000545848 CSTL1Q9H114 145 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 WFDC1Q9HC57 220 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 NRN1Q9NPD7 142 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 XCL2Q9UBD3 114 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 STRAPQ9Y3F4 350 aaKnown RBP4.49□□□□□ -1.69
LDHC-209ENST00000545848 HERC2O95714 4834 aa4.49□□□□□ -1.69
LDHC-209ENST00000545848 TRAV30A0A087WSZ9 112 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 KIR2DL5BA0A0G2JN68 375 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 KIR2DL5BA0A0G2JPC4 375 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 UBE2L5PA0A1B0GUS4 154 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 SERTM2A0A1B0GWG4 89 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 PLAC8L1A1L4L8 177 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 ZNF705FA8MVS1 300 aaPredicted RBP4.48□□□□□ -1.69
LDHC-209ENST00000545848 ZNF705EA8MWA4 302 aaPredicted RBP4.48□□□□□ -1.69
LDHC-209ENST00000545848 DNASE2O00115 360 aaPredicted RBP4.48□□□□□ -1.69
LDHC-209ENST00000545848 AGPAT2O15120 278 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 HLA-DRB4P13762 266 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 INPP1P49441 399 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 S100A10P60903 97 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 SSTP61278 116 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 DLK1P80370 383 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 OPCMLQ14982 345 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 VWC2Q2TAL6 325 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 LRRC37A5PQ49AS3 106 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 SMUG1Q53HV7 270 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 Q6ZTC4 211 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 BAP18Q8IXM2 172 aa4.48□□□□□ -1.69
LDHC-209ENST00000545848 KIR2DL5AQ8N109 375 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms