RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CCDC22O60826 627 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 EDF1O60869 148 aaKnown RBP1.58□□□□□ -2.16
SNHG1-224ENST00000545688 REG1AP05451 166 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 CTSGP08311 255 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 CD37P11049 281 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 COX4I1P13073 169 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 GTF2F2P13984 249 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 HIST1H1BP16401 226 aaKnown RBP1.58□□□□□ -2.16
SNHG1-224ENST00000545688 DEFB131AP59861 70 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 RSU1Q15404 277 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 MAPRE2Q15555 327 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 C10orf55Q5SWW7 151 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM236Q5W0B7 351 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 OR2T5Q6IEZ7 315 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 UQCC3Q6UW78 93 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 SSX9Q7RTT3 188 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 SSX7Q7RTT5 188 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 ADM2Q7Z4H4 148 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 CROCCP2Q86T23 111 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM256Q8N2U0 113 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 STX19Q8N4C7 294 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 OR2T29Q8NH02 315 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 DCANP1Q8TF63 244 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 TNFAIP8L1Q8WVP5 186 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 MCUR1Q96AQ8 359 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 EEF1AKMT3Q96AZ1 226 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 OR2A7Q96R45 310 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 RHPN1-AS1Q9BWJ2 59 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 METTL9Q9H1A3 318 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 SDHAF2Q9NX18 166 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 NKIRAS1Q9NYS0 192 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 ING4Q9UNL4 249 aa1.58□□□□□ -2.16
SNHG1-224ENST00000545688 PUS1Q9Y606 427 aaKnown RBP eCLIP1.58□□□□□ -2.16
SNHG1-224ENST00000545688 IGLC7A0M8Q6 106 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 H3BN98 237 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 PDCD6O75340 191 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 APOA2P02652 100 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 RPSAP08865 295 aaKnown RBP1.57□□□□□ -2.16
SNHG1-224ENST00000545688 SAA1P0DJI8 122 aaPredicted RBP1.57□□□□□ -2.16
SNHG1-224ENST00000545688 RAB3AP20336 220 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 CCL18P55774 89 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 TAS2R31P59538 309 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 OR2B8PP59922 312 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 PSME3P61289 254 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 SNRPGP62308 76 aaKnown RBP1.57□□□□□ -2.16
SNHG1-224ENST00000545688 TMED1Q13445 227 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 CDK10Q15131 360 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 TNXAQ16473 311 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 ESRGQ1W209 222 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 RNASE13Q5GAN3 156 aaKnown RBP1.57□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM69Q5SWH9 247 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 FAM222AQ5U5X8 452 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 LPCAT4Q643R3 524 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 C12orf73Q69YU5 71 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 CDH26Q8IXH8 852 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 HS3ST5Q8IZT8 346 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 C1orf158Q8N1D5 194 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM167AQ8TBQ9 72 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 MS4A6AQ9H2W1 248 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 EFCAB1Q9HAE3 211 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 NEK6Q9HC98 313 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 TMEM138Q9NPI0 162 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 SLC35D1Q9NTN3 355 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 TVP23BQ9NYZ1 205 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 MRPS16Q9Y3D3 137 aaKnown RBP1.57□□□□□ -2.16
SNHG1-224ENST00000545688 PEX16Q9Y5Y5 336 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 V9GYQ6 96 aa1.57□□□□□ -2.16
SNHG1-224ENST00000545688 MUC17Q685J3 4493 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 A0A0G2JND7 137 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 KNCNA6PVL3 124 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 A8MTW9 85 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 H3BMM0 161 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 H3BNG1 76 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 K7EIM0 57 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 K7EQM0 130 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 M0R129 80 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 M0R1X1 148 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 IFNA5P01569 189 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 HTR1AP08908 422 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 ANXA8P13928 327 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 GNRHRP30968 328 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 ZNF93P35789 620 aaPredicted RBP1.56□□□□□ -2.16
SNHG1-224ENST00000545688 RPL27AP46776 148 aaKnown RBP1.56□□□□□ -2.16
SNHG1-224ENST00000545688 QRFPP83859 136 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 GPR176Q14439 515 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 VMA21Q3ZAQ7 101 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 MPV17L2Q567V2 206 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 YIF1BQ5BJH7 314 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 UBE2UQ5VVX9 321 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 IDO2Q6ZQW0 420 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 TCF24Q7RTU0 167 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 SYS1Q8N2H4 156 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 CBR4Q8N4T8 237 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 NEK7Q8TDX7 302 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 ACOT12Q8WYK0 555 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 CPNE2Q96FN4 548 aaPredicted RBP1.56□□□□□ -2.16
SNHG1-224ENST00000545688 TBX5Q99593 518 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 PHB2Q99623 299 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 PDCD1LG2Q9BQ51 273 aa1.56□□□□□ -2.16
SNHG1-224ENST00000545688 FAAP24Q9BTP7 215 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms