RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 LYZP61626 148 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 OR2F1Q13607 317 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 OR8G2PQ6IF36 304 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 TMUB2Q71RG4 321 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 POM121L12Q8N7R1 296 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 SCGB3A2Q96PL1 93 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 NEU1Q99519 415 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 SEC22CQ9BRL7 303 aa6.05□□□□□ -1.44
USP28-215ENST00000545608 HERC2O95714 4834 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 IGHV3OR16-12A0A075B7B8 117 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 A0A1B0GVY2 172 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 RAB19A4D1S5 217 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 F6UB75 175 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 M0R2N4 97 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 PITX3O75364 302 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 SNAPINO95295 136 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 SPART-AS1P0CW21 52 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 IAPPP10997 89 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 PVALBP20472 110 aaPredicted RBP6.04□□□□□ -1.44
USP28-215ENST00000545608 BTCP35070 178 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 ID1P41134 155 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 MEOX2P50222 304 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 ATP5IP56385 69 aaPredicted RBP6.04□□□□□ -1.44
USP28-215ENST00000545608 RNF151Q2KHN1 245 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 FOXI2Q6ZQN5 318 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 ZNF709Q8N972 641 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 OR4B1Q8NGF8 309 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 OR1S1Q8NH92 325 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 SLC35E1Q96K37 410 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 NDUFAF3Q9BU61 184 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 ARL6Q9H0F7 186 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 SLC35B3Q9H1N7 401 aa6.04□□□□□ -1.44
USP28-215ENST00000545608 IGKV1OR2-108A0A075B7D4 117 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 KANTRA0A1W2PQU2 76 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 SMIM9A6NGZ8 99 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 WRBO00258 174 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 CFDP00746 253 aaPredicted RBP6.03□□□□□ -1.44
USP28-215ENST00000545608 P0DMU3 169 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 FAM231AP0DMU4 169 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 FAM231CP0DMU5 169 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 RPL35P42766 123 aaKnown RBP6.03□□□□□ -1.44
USP28-215ENST00000545608 PSMB3P49720 205 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 RAB5BP61020 215 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 SSTP61278 116 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 C1orf194Q5T5A4 169 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 C1orf158Q8N1D5 194 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 C12orf45Q8N5I9 185 aaPredicted RBP6.03□□□□□ -1.44
USP28-215ENST00000545608 C20orf173Q96LM9 149 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 C17orf77Q96MU5 243 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 TRGV9Q99603 122 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 RFNGQ9Y644 331 aa6.03□□□□□ -1.44
USP28-215ENST00000545608 A0A0J9YX75 114 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 TMEM189A5PLL7 270 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 PRSS29PA6NIE9 313 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 RTL8CO15255 209 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 S100PP25815 95 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 PAX9P55771 341 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 RAB11AP62491 216 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 SRPXP78539 464 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 PSG9Q00887 426 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 FAM222AQ5U5X8 452 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 FAM78BQ5VT40 261 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 TMEM182Q6ZP80 229 aaPredicted RBP6.02□□□□□ -1.45
USP28-215ENST00000545608 TMED4Q7Z7H5 227 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 OR8I2Q8N0Y5 310 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 THAP8Q8NA92 274 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
USP28-215ENST00000545608 FXYD6-FXYD2A0A087WZ82 144 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 DUXBA0A1W2PPF3 345 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 PRSS46E5RG02 174 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 ISLRO14498 428 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 ARPC5O15511 151 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 NDUFB6O95139 128 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 FABP1P07148 127 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 CXCL2P19875 107 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 GATA2P23769 480 aaPredicted RBP6.01□□□□□ -1.45
USP28-215ENST00000545608 POLR2GP62487 172 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP28-215ENST00000545608 ZNF345Q14585 488 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 LGALS9BQ3B8N2 356 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 TMEM128Q5BJH2 165 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 SPATA31B1PQ5VZV4 182 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 EBLN2Q6P2I7 272 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 ALKAL2Q6UX46 152 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 LRTM2Q8N967 370 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 NIPSNAP3BQ9BS92 247 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 RSG1Q9BU20 258 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 MAGT1Q9H0U3 335 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 GOLT1BQ9Y3E0 138 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
USP28-215ENST00000545608 IGLV2-18A0A075B6J9 118 aa6□□□□□ -1.45
USP28-215ENST00000545608 A0A087WWL8 130 aa6□□□□□ -1.45
USP28-215ENST00000545608 LOC102723971A0A1B0GUV8 181 aa6□□□□□ -1.45
USP28-215ENST00000545608 A8MTW9 85 aa6□□□□□ -1.45
USP28-215ENST00000545608 SYNGR2O43760 224 aa6□□□□□ -1.45
USP28-215ENST00000545608 MED6O75586 246 aa6□□□□□ -1.45
USP28-215ENST00000545608 SFT2D2O95562 160 aa6□□□□□ -1.45
USP28-215ENST00000545608 IFNA21P01568 189 aa6□□□□□ -1.45
USP28-215ENST00000545608 HBE1P02100 147 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms