RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CCDC28AQ8IWP9 274 aa9.98□□□□□ -0.81
RTN3-214ENST00000545432 TMPRSS5Q9H3S3 457 aa9.98□□□□□ -0.81
RTN3-214ENST00000545432 NXPH4O95158 308 aa9.97□□□□□ -0.81
RTN3-214ENST00000545432 AKR1C4P17516 323 aa9.97□□□□□ -0.81
RTN3-214ENST00000545432 NCS1P62166 190 aa9.97□□□□□ -0.81
RTN3-214ENST00000545432 FAAP20Q6NZ36 180 aa9.97□□□□□ -0.81
RTN3-214ENST00000545432 ACOT7LQ6ZUV0 252 aa9.97□□□□□ -0.81
RTN3-214ENST00000545432 RPUSD4Q96CM3 377 aaKnown RBP9.97□□□□□ -0.81
RTN3-214ENST00000545432 PPP1R14DQ9NXH3 145 aa9.97□□□□□ -0.81
RTN3-214ENST00000545432 PRR13Q9NZ81 148 aa9.97□□□□□ -0.81
RTN3-214ENST00000545432 FAM25AB3EWG3 89 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 FAM25CB3EWG5 89 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 FAM25GB3EWG6 89 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 DISC1C4P0D8 188 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 FGL1Q08830 312 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 GFI1BQ5VTD9 330 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 MZT2AQ6P582 158 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 Q6ZTI0 123 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 EXTL2Q9UBQ6 330 aa9.96□□□□□ -0.82
RTN3-214ENST00000545432 LRP1Q07954 4544 aaKnown RBP9.95□□□□□ -0.82
RTN3-214ENST00000545432 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
RTN3-214ENST00000545432 ZNF324O75467 553 aaPredicted RBP9.95□□□□□ -0.82
RTN3-214ENST00000545432 SLC25A6P12236 298 aa9.95□□□□□ -0.82
RTN3-214ENST00000545432 CXCL2P19875 107 aa9.95□□□□□ -0.82
RTN3-214ENST00000545432 MRPS10P82664 201 aaKnown RBP9.95□□□□□ -0.82
RTN3-214ENST00000545432 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
RTN3-214ENST00000545432 ZNF331Q9NQX6 463 aaPredicted RBP9.95□□□□□ -0.82
RTN3-214ENST00000545432 VBP1P61758 197 aa9.94□□□□□ -0.82
RTN3-214ENST00000545432 C11orf72Q8NBR9 251 aa9.94□□□□□ -0.82
RTN3-214ENST00000545432 PRRT1Q99946 306 aa9.94□□□□□ -0.82
RTN3-214ENST00000545432 PYGO2Q9BRQ0 406 aa9.94□□□□□ -0.82
RTN3-214ENST00000545432 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
RTN3-214ENST00000545432 TRAV9-2A0A087WT02 112 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 DUXBA0A1W2PPF3 345 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 LRCOL1A6NCL2 159 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 C1QBP02746 253 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 AKAIN1P0CW23 69 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 RAP2BP61225 183 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 SRPXP78539 464 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 HAMPP81172 84 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 CYP2G1PQ6ZSU1 146 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 LRTM2Q8N967 370 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 ZBTB8BQ8NAP8 495 aaPredicted RBP9.93□□□□□ -0.82
RTN3-214ENST00000545432 NTN5Q8WTR8 489 aaPredicted RBP9.93□□□□□ -0.82
RTN3-214ENST00000545432 ODF3Q96PU9 254 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 CIB3Q96Q77 187 aaPredicted RBP9.93□□□□□ -0.82
RTN3-214ENST00000545432 FUNDC2Q9BWH2 189 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 VCX3AQ9NNX9 186 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
RTN3-214ENST00000545432 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 HYPMO75409 117 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 IAPPP10997 89 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 PATE2Q6UY27 113 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 OR51S1Q8NGJ8 323 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 ZNF431Q8TF32 576 aaPredicted RBP9.92□□□□□ -0.82
RTN3-214ENST00000545432 SMIM4Q8WVI0 70 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 AP3S1Q92572 193 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 PARD6GQ9BYG4 376 aaPredicted RBP9.92□□□□□ -0.82
RTN3-214ENST00000545432 MIXL1Q9H2W2 232 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 MSRB1Q9NZV6 116 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 FAM30AQ9NZY2 134 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 ICOSQ9Y6W8 199 aa9.92□□□□□ -0.82
RTN3-214ENST00000545432 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 K7EPK0 472 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 CTDSPLO15194 276 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 SPINK4O60575 86 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 MED6O75586 246 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 SELENOTP62341 195 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 RPP30P78346 268 aaKnown RBP9.91□□□□□ -0.82
RTN3-214ENST00000545432 CCDC190Q86UF4 302 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 SCGB3A2Q96PL1 93 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 SLC50A1Q9BRV3 221 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 LY96Q9Y6Y9 160 aa9.91□□□□□ -0.82
RTN3-214ENST00000545432 TRGV2A0A075B6R0 118 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 A0A087WXM4 84 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 PAX4O43316 350 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 SYNGR2O43760 224 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 IL5P05113 134 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 PRB4P10163 310 aaPredicted RBP9.9□□□□□ -0.82
RTN3-214ENST00000545432 SLAQ13239 276 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 TEPPQ6URK8 271 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 LCN15Q6UWW0 184 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 S100A7AQ86SG5 101 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 LRRC20Q8TCA0 184 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 DEFB104AQ8WTQ1 72 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 PRO0255Q9UI72 69 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 RNF24Q9Y225 148 aa9.9□□□□□ -0.82
RTN3-214ENST00000545432 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.83
RTN3-214ENST00000545432 PMS2P5A8MQ11 134 aa9.89□□□□□ -0.83
RTN3-214ENST00000545432 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
RTN3-214ENST00000545432 CT45A10P0DMU9 189 aa9.89□□□□□ -0.83
RTN3-214ENST00000545432 ANXA3P12429 323 aa9.89□□□□□ -0.83
RTN3-214ENST00000545432 MRPL23Q16540 153 aaKnown RBP9.89□□□□□ -0.83
RTN3-214ENST00000545432 Q6ZSA8 131 aa9.89□□□□□ -0.83
RTN3-214ENST00000545432 CLVS1Q8IUQ0 354 aaPredicted RBP9.89□□□□□ -0.83
RTN3-214ENST00000545432 SYT8Q8NBV8 401 aa9.89□□□□□ -0.83
RTN3-214ENST00000545432 ZNF680Q8NEM1 530 aa9.89□□□□□ -0.83
RTN3-214ENST00000545432 SAT2Q96F10 170 aaPredicted RBP9.89□□□□□ -0.83
RTN3-214ENST00000545432 ST6GAL2Q96JF0 529 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms