RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 MYCNOSP40205 109 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 CEBPGP53567 150 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 CD81P60033 236 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 KRTAP10-3P60369 221 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
SCARB1-209ENST00000545305 PSG9Q00887 426 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 KRTAP24-1Q3LI83 254 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 LYPD1Q8N2G4 141 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 OR9G4Q8NGQ1 327 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 DLX4Q92988 240 aaPredicted RBP10.49□□□□□ -0.73
SCARB1-209ENST00000545305 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 Q9H3A6 140 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 AAMDCQ9H7C9 122 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 OTORQ9NRC9 128 aa10.49□□□□□ -0.73
SCARB1-209ENST00000545305 TEP1Q99973 2627 aaKnown RBP10.48□□□□□ -0.73
SCARB1-209ENST00000545305 ADARB2-AS1A8MUL3 147 aa10.48□□□□□ -0.73
SCARB1-209ENST00000545305 C9JQL5 133 aa10.48□□□□□ -0.73
SCARB1-209ENST00000545305 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
SCARB1-209ENST00000545305 ZNF253O75346 499 aa10.48□□□□□ -0.73
SCARB1-209ENST00000545305 SUMO1P63165 101 aaKnown RBP10.48□□□□□ -0.73
SCARB1-209ENST00000545305 CYB561D1Q8N8Q1 229 aa10.48□□□□□ -0.73
SCARB1-209ENST00000545305 SLC50A1Q9BRV3 221 aa10.48□□□□□ -0.73
SCARB1-209ENST00000545305 SMAD5-AS1Q9Y6J3 95 aa10.48□□□□□ -0.73
SCARB1-209ENST00000545305 JMJD1CQ15652 2540 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 PGPA6NDG6 321 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 F8W036 122 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 OVOL1O14753 267 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 PF4P02776 101 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
SCARB1-209ENST00000545305 FOLR2P14207 255 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 CBLN1P23435 193 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 RPL11P62913 178 aaKnown RBP10.47□□□□□ -0.73
SCARB1-209ENST00000545305 SOHLH1Q5JUK2 328 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 TCF24Q7RTU0 167 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 PRIMA1Q86XR5 153 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 CMTM2Q8TAZ6 248 aa10.47□□□□□ -0.73
SCARB1-209ENST00000545305 SETD2Q9BYW2 2564 aaPredicted RBP10.47□□□□□ -0.73
SCARB1-209ENST00000545305 SCO2A0A1W2PP80 73 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 SLC17A3O00476 420 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 NDUFB4O95168 129 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 EDN2P20800 178 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 C5orf17Q8NAS9 161 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 DYNLRB2Q8TF09 96 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 C17orf77Q96MU5 243 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 LINC00052Q96N35 136 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 CITED1Q99966 193 aa10.46□□□□□ -0.73
SCARB1-209ENST00000545305 CSN1S1P47710 185 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 CCDC28AQ8IWP9 274 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 EXOC3-AS1Q8N2X6 119 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 HIST1H2BAQ96A08 127 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 C11orf52Q96A22 123 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
SCARB1-209ENST00000545305 SEC11CQ9BY50 192 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 NRN1Q9NPD7 142 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 RPH3ALQ9UNE2 315 aa10.45□□□□□ -0.74
SCARB1-209ENST00000545305 NIPBLQ6KC79 2804 aaeCLIP10.44□□□□□ -0.74
SCARB1-209ENST00000545305 PEX7O00628 323 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 CSN3P07498 182 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 AKR1C3P42330 323 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 ZNF674Q2M3X9 581 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 FAM74A3Q4VXF1 159 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 FAM90A2PQ658T7 463 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 C16orf92Q96LL3 132 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 SMIM7Q9BQ49 75 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 ZNF331Q9NQX6 463 aaPredicted RBP10.44□□□□□ -0.74
SCARB1-209ENST00000545305 CLEC5AQ9NY25 188 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 EPDR1Q9UM22 224 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 PRELID1Q9Y255 219 aa10.44□□□□□ -0.74
SCARB1-209ENST00000545305 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
SCARB1-209ENST00000545305 ZNF727A8MUV8 499 aa10.43□□□□□ -0.74
SCARB1-209ENST00000545305 K7EQM0 130 aa10.43□□□□□ -0.74
SCARB1-209ENST00000545305 ADCYAP1P18509 176 aa10.43□□□□□ -0.74
SCARB1-209ENST00000545305 CNN1P51911 297 aaKnown RBP10.43□□□□□ -0.74
SCARB1-209ENST00000545305 ATG101Q9BSB4 218 aa10.43□□□□□ -0.74
SCARB1-209ENST00000545305 PARLQ9H300 379 aa10.43□□□□□ -0.74
SCARB1-209ENST00000545305 MLXQ9UH92 298 aa10.43□□□□□ -0.74
SCARB1-209ENST00000545305 CARHSP1Q9Y2V2 147 aaKnown RBP10.43□□□□□ -0.74
SCARB1-209ENST00000545305 DNASE2O00115 360 aaPredicted RBP10.42□□□□□ -0.74
SCARB1-209ENST00000545305 APOC3P02656 99 aa10.42□□□□□ -0.74
SCARB1-209ENST00000545305 ID1P41134 155 aa10.42□□□□□ -0.74
SCARB1-209ENST00000545305 GNG5P63218 68 aa10.42□□□□□ -0.74
SCARB1-209ENST00000545305 PAFAH1B2P68402 229 aa10.42□□□□□ -0.74
SCARB1-209ENST00000545305 C12orf54Q6X4T0 127 aa10.42□□□□□ -0.74
SCARB1-209ENST00000545305 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
SCARB1-209ENST00000545305 NIPSNAP3BQ9BS92 247 aa10.42□□□□□ -0.74
SCARB1-209ENST00000545305 SELENOKQ9Y6D0 94 aa10.42□□□□□ -0.74
SCARB1-209ENST00000545305 SERTM2A0A1B0GWG4 89 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 ISLRO14498 428 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 TCRAP04437 139 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 S100A9P06702 114 aaKnown RBP10.41□□□□□ -0.74
SCARB1-209ENST00000545305 UBE2G1P62253 170 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 C10orf91Q5T1B1 145 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 ADAMTSL5Q6ZMM2 481 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 RBPMS2Q6ZRY4 209 aaKnown RBP10.41□□□□□ -0.74
SCARB1-209ENST00000545305 GBGT1Q8N5D6 347 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 ARL6IP6Q8N6S5 226 aa10.41□□□□□ -0.74
SCARB1-209ENST00000545305 C3orf56Q8N813 242 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms