RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 IL17RELQ6ZVW7 336 aa8.46□□□□□ -1.05
PCDH9-204ENST00000544246 Q8N8P6 123 aa8.46□□□□□ -1.05
PCDH9-204ENST00000544246 DEFB131AP59861 70 aa8.46□□□□□ -1.05
PCDH9-204ENST00000544246 UNQ6494/PRO21346Q6UXR6 183 aa8.46□□□□□ -1.06
PCDH9-204ENST00000544246 BRD3OSQ6XYD6 125 aa8.46□□□□□ -1.06
PCDH9-204ENST00000544246 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.06
PCDH9-204ENST00000544246 VWC2Q2TAL6 325 aa8.46□□□□□ -1.06
PCDH9-204ENST00000544246 TMEM75Q8N9X5 138 aa8.46□□□□□ -1.06
PCDH9-204ENST00000544246 WFDC9Q8NEX5 89 aa8.46□□□□□ -1.06
PCDH9-204ENST00000544246 IGKV1-9A0A0C4DH69 117 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 UBE2BP63146 152 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 SPRR3Q9UBC9 169 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 CACNA1CQ13936 2221 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 KNCNA6PVL3 124 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 SHISA9B4DS77 424 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 BUB1B-PAK6H3BSN5 160 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 ASXL3Q9C0F0 2248 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 SCN8AQ9UQD0 1980 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 TMEM178BH3BS89 294 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 ZSWIM8A7E2V4 1837 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 SIPA1L1O43166 1804 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 TRAV3A0A0B4J244 114 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 ATP6V0BQ99437 205 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 CNTRLQ7Z7A1 2325 aa8.45□□□□□ -1.06
PCDH9-204ENST00000544246 IGHG2P01859 326 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 SYNJ2BPP57105 145 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 LINC01619G3V211 115 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 HGFACQ04756 655 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
PCDH9-204ENST00000544246 LINC01356Q8N9X3 169 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-204ENST00000544246 TPRP12270 2363 aaKnown RBP8.44□□□□□ -1.06
PCDH9-204ENST00000544246 PRSS46E5RG02 174 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 K7EP34 96 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 APOC4P55056 127 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 XCL2Q9UBD3 114 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 IGKV1D-8A0A087WSZ0 117 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 CRYBA4P53673 196 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 DEFB105AQ8NG35 78 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 SHANK2-AS3Q9BTD1 123 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 A0A0G2JMZ2 1700 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 MIA3Q5JRA6 1907 aa8.44□□□□□ -1.06
PCDH9-204ENST00000544246 CRYGCP07315 174 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 FOXF2Q12947 444 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 ZNF664Q8N3J9 261 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 BAALCQ8WXS3 180 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 C1orf43Q9BWL3 253 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 CYTL1Q9NRR1 136 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 E9PQ18 207 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 IGKV1-5P01602 117 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 PKIGQ9Y2B9 76 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 PTPRFP10586 1907 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 SRRM5B3KS81 715 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 PSPNO60542 156 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 OVOL3O00110 214 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 PDE6HQ13956 83 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 TMEM14EPQ6UXP3 125 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 CD177Q8N6Q3 437 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 SRSF8Q9BRL6 282 aaKnown RBP8.43□□□□□ -1.06
PCDH9-204ENST00000544246 PAX9P55771 341 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 ZNF492Q9P255 531 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 SIGLEC9Q9Y336 463 aa8.43□□□□□ -1.06
PCDH9-204ENST00000544246 TGFBR3LH3BV60 316 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 NTF4P34130 210 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 LY6DQ14210 128 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 NMSQ5H8A3 153 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 TRPM6Q9BX84 2022 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 TMEM213A2RRL7 107 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 RNASE2P10153 161 aaKnown RBP8.42□□□□□ -1.06
PCDH9-204ENST00000544246 HERVK_113P63121 156 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 CEND1Q8N111 149 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 PRO1854Q9UHT4 67 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 THSD7BQ9C0I4 1608 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 GAGE7O76087 117 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 PFN1P07737 140 aaKnown RBP8.42□□□□□ -1.06
PCDH9-204ENST00000544246 GAGE12FP0CL80 117 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 GAGE12GP0CL81 117 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 GAGE12IP0CL82 117 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 RPP25LQ8N5L8 163 aaKnown RBP8.42□□□□□ -1.06
PCDH9-204ENST00000544246 ZNRF2Q8NHG8 242 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 CABIN1Q9Y6J0 2220 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 TEX48A0A1B0GUV7 120 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 PAQR4Q8N4S7 273 aaPredicted RBP8.42□□□□□ -1.06
PCDH9-204ENST00000544246 ZFC3H1O60293 1989 aaKnown RBP8.42□□□□□ -1.06
PCDH9-204ENST00000544246 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 GAFA1Q96PS6 74 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 ORMDL1Q9P0S3 153 aa8.42□□□□□ -1.06
PCDH9-204ENST00000544246 IGHV1-24A0A0C4DH33 117 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 GATA4P43694 442 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 Q0VG73 95 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 IGHV3-38A0A0C4DH36 116 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 HS3ST6Q96QI5 342 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms