RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
TNFRSF1A-216ENST00000543995 H3BTX0 84 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 ISLRO14498 428 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 HMGB3O15347 200 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 OR10J4P0C629 311 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 PSMB3P49720 205 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 LCN15Q6UWW0 184 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 PAXXQ9BUH6 204 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 SRD5A3Q9H8P0 318 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 C19orf73Q9NVV2 129 aa10.78□□□□□ -0.68
TNFRSF1A-216ENST00000543995 NOTCH1P46531 2555 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 H3BQ15 152 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 SOCS3O14543 225 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 IGHV4-30-4P0DP06 118 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ZNF124Q15973 351 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 GUK1Q16774 197 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 BLNKQ8WV28 456 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 TMED6Q8WW62 240 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RAB24Q969Q5 203 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ZNF586Q9NXT0 402 aa10.77□□□□□ -0.69
TNFRSF1A-216ENST00000543995 HIST1H1EP10412 219 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-216ENST00000543995 UBE2L3P68036 154 aaKnown RBP10.76□□□□□ -0.69
TNFRSF1A-216ENST00000543995 IGFL4Q6B9Z1 124 aa10.76□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RNF141Q8WVD5 230 aa10.76□□□□□ -0.69
TNFRSF1A-216ENST00000543995 SLC50A1Q9BRV3 221 aa10.76□□□□□ -0.69
TNFRSF1A-216ENST00000543995 UMAD1C9J7I0 102 aa10.75□□□□□ -0.69
TNFRSF1A-216ENST00000543995 PQLC2Q6ZP29 291 aa10.75□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RNF182Q8N6D2 247 aa10.75□□□□□ -0.69
TNFRSF1A-216ENST00000543995 NBEAL1Q6ZS30 2694 aa10.75□□□□□ -0.69
TNFRSF1A-216ENST00000543995 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 CTXND1A0A1B0GTU2 59 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 SLC17A3O00476 420 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 NBEAP1P0C6P0 100 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 STAG3L2P0CL84 134 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 STAG3L3P0CL85 134 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ARL14EPLP0DKL9 152 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ZNF503Q96F45 646 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 FRMD6-AS1P0C7T7 363 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 PDE6HQ13956 83 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ACTL10Q5JWF8 245 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 SSX7Q7RTT5 188 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 IQCF2Q8IXL9 164 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ZNF738Q8NE65 137 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 SAT2Q96F10 170 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 C20orf173Q96LM9 149 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 CITED4Q96RK1 184 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
TNFRSF1A-216ENST00000543995 KNCNA6PVL3 124 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 A8MZ25 164 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ZNF253O75346 499 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 CXorf1O96002 111 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 HLA-DMBP28068 263 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 FHITP49789 147 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 PSG9Q00887 426 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 STHQ8IWL8 128 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 AAMDCQ9H7C9 122 aa10.73□□□□□ -0.69
TNFRSF1A-216ENST00000543995 FGF8P55075 233 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-216ENST00000543995 DEFB1P60022 68 aa10.72□□□□□ -0.69
TNFRSF1A-216ENST00000543995 PSG3Q16557 428 aa10.72□□□□□ -0.69
TNFRSF1A-216ENST00000543995 EBLN2Q6P2I7 272 aa10.72□□□□□ -0.69
TNFRSF1A-216ENST00000543995 DPPA3Q6W0C5 159 aa10.72□□□□□ -0.69
TNFRSF1A-216ENST00000543995 LOC102724200A0A096LPH7 203 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 MAP1LC3B2A6NCE7 125 aa10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RBMY1BA6NDE4 496 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RBMY1EA6NEQ0 496 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 NDUFB4O95168 129 aa10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RBMY1DP0C7P1 496 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 GCHFRP30047 84 aa10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RANP62826 216 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 FOXI2Q6ZQN5 318 aa10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 PHYHIPLQ96FC7 376 aa10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 MAP1LC3BQ9GZQ8 125 aa10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 CLEC5AQ9NY25 188 aa10.71□□□□□ -0.69
TNFRSF1A-216ENST00000543995 RAB5CP51148 216 aa10.7□□□□□ -0.7
TNFRSF1A-216ENST00000543995 ICAM4Q14773 271 aa10.7□□□□□ -0.7
TNFRSF1A-216ENST00000543995 EXOC3-AS1Q8N2X6 119 aa10.7□□□□□ -0.7
TNFRSF1A-216ENST00000543995 SAV1Q9H4B6 383 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-216ENST00000543995 TMEM167BQ9NRX6 74 aa10.7□□□□□ -0.7
TNFRSF1A-216ENST00000543995 AGRNO00468 2067 aa10.7□□□□□ -0.7
TNFRSF1A-216ENST00000543995 ZNF705FA8MVS1 300 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 F6UB75 175 aa10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 PRB4P10163 310 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 SULT1A2P50226 295 aa10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 GDF5OSQ5U4N7 250 aa10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 ALKAL2Q6UX46 152 aa10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 SFT2D1Q8WV19 159 aa10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 RPUSD4Q96CM3 377 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 Q9H3A6 140 aa10.69□□□□□ -0.7
TNFRSF1A-216ENST00000543995 H2AFB1P0C5Y9 115 aa10.68□□□□□ -0.7
TNFRSF1A-216ENST00000543995 HLA-DRB4P13762 266 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms