RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ELANEP08246 267 aa15.23■□□□□ 0.03
COPS7A-218ENST00000543939 GALR1P47211 349 aa15.23■□□□□ 0.03
COPS7A-218ENST00000543939 UNQ9165/PRO28630Q6UXU0 137 aa15.23■□□□□ 0.03
COPS7A-218ENST00000543939 MYOZ3Q8TDC0 251 aa15.23■□□□□ 0.03
COPS7A-218ENST00000543939 SERTAD4Q9NUC0 356 aa15.23■□□□□ 0.03
COPS7A-218ENST00000543939 PEF1Q9UBV8 284 aaKnown RBP15.23■□□□□ 0.03
COPS7A-218ENST00000543939 A0A087X0K7 114 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 UBE2G1P62253 170 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 PSG9Q00887 426 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 OR5I1Q13606 314 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 BAGE2Q86Y30 109 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 OR10G8Q8NGN5 311 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 FMC1Q96HJ9 113 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 OR5B12Q96R08 314 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 TMEM160Q9NX00 188 aa15.22■□□□□ 0.03
COPS7A-218ENST00000543939 ZNF253O75346 499 aa15.21■□□□□ 0.03
COPS7A-218ENST00000543939 RPLP1P05386 114 aaKnown RBP15.21■□□□□ 0.03
COPS7A-218ENST00000543939 RNF152Q8N8N0 203 aa15.21■□□□□ 0.03
COPS7A-218ENST00000543939 MYO9AB2RTY4 2548 aa15.21■□□□□ 0.03
COPS7A-218ENST00000543939 IGHV3-66A0A0C4DH42 116 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 AAMDCQ9H7C9 122 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 ESM1Q9NQ30 184 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 TRBV24-1A0A075B6N3 115 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 IGHV3OR16-13A0A075B7E8 117 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 IGHV3-49A0A0A0MS15 119 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 IGHV3-74A0A0B4J1X5 117 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 GOLT1AQ6ZVE7 132 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 SGK494Q96LW2 274 aa15.2■□□□□ 0.02
COPS7A-218ENST00000543939 FAM181BA6NEQ2 426 aa15.19■□□□□ 0.02
COPS7A-218ENST00000543939 S100PP25815 95 aa15.19■□□□□ 0.02
COPS7A-218ENST00000543939 C16orf54Q6UWD8 224 aa15.19■□□□□ 0.02
COPS7A-218ENST00000543939 NHLRC2Q8NBF2 726 aa15.19■□□□□ 0.02
COPS7A-218ENST00000543939 SMIM12Q96EX1 92 aa15.19■□□□□ 0.02
COPS7A-218ENST00000543939 IMMP2LQ96T52 175 aa15.19■□□□□ 0.02
COPS7A-218ENST00000543939 PYGO2Q9BRQ0 406 aa15.19■□□□□ 0.02
COPS7A-218ENST00000543939 ZNF785A8K8V0 405 aa15.18■□□□□ 0.02
COPS7A-218ENST00000543939 M0R3E3 92 aa15.18■□□□□ 0.02
COPS7A-218ENST00000543939 LTAP01374 205 aa15.18■□□□□ 0.02
COPS7A-218ENST00000543939 IGLV2-11P01706 119 aa15.18■□□□□ 0.02
COPS7A-218ENST00000543939 MGST1P10620 155 aaKnown RBP15.18■□□□□ 0.02
COPS7A-218ENST00000543939 ERVFC1-1P60608 527 aa15.18■□□□□ 0.02
COPS7A-218ENST00000543939 OSTCQ9NRP0 149 aa15.18■□□□□ 0.02
COPS7A-218ENST00000543939 TRBV6-1A0A0K0K1D8 114 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 DIRC3C9JPN6 131 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 ARL6IP6Q8N6S5 226 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 GLMPQ8WWB7 406 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 FAM210BQ96KR6 192 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 SMR3AQ99954 134 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 MLST8Q9BVC4 326 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 ZNF331Q9NQX6 463 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-218ENST00000543939 SCGB2A2Q13296 93 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 Q6ZSV7 163 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 Q86TA4 180 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 TMEM75Q8N9X5 138 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 UBE2E2Q96LR5 201 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 MLXQ9UH92 298 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 V9GYV3 84 aa15.17■□□□□ 0.02
COPS7A-218ENST00000543939 ANK3Q12955 4377 aaKnown RBP15.16■□□□□ 0.02
COPS7A-218ENST00000543939 TRAV8-1A0A0A6YYK1 113 aa15.16■□□□□ 0.02
COPS7A-218ENST00000543939 LGALS1P09382 135 aaKnown RBP15.16■□□□□ 0.02
COPS7A-218ENST00000543939 FOXL1Q12952 345 aa15.16■□□□□ 0.02
COPS7A-218ENST00000543939 KCNIP4Q6PIL6 250 aa15.16■□□□□ 0.02
COPS7A-218ENST00000543939 GPHB5Q86YW7 130 aa15.16■□□□□ 0.02
COPS7A-218ENST00000543939 RNASE7Q9H1E1 156 aaKnown RBP15.16■□□□□ 0.02
COPS7A-218ENST00000543939 ZNF320A2RRD8 509 aa15.15■□□□□ 0.02
COPS7A-218ENST00000543939 K7EQM0 130 aa15.15■□□□□ 0.02
COPS7A-218ENST00000543939 RPS10P46783 165 aaKnown RBP15.15■□□□□ 0.02
COPS7A-218ENST00000543939 CSN1S1P47710 185 aa15.15■□□□□ 0.02
COPS7A-218ENST00000543939 C1orf196B1AJZ1 125 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 MEOX2P50222 304 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 FAM106AQ4KMX7 169 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 IBA57Q5T440 356 aaKnown RBP15.14■□□□□ 0.01
COPS7A-218ENST00000543939 FAM231DQ6ZW35 169 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 C1QL4Q86Z23 238 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 KLHDC1Q8N7A1 406 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 SLC50A1Q9BRV3 221 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 IL36BQ9NZH7 164 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 SERTM2A0A1B0GWG4 89 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 A0A1W2PPQ1 181 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 K7EMT4 169 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 LY6G6DO95868 133 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 FAM3BP58499 235 aaPredicted RBP15.14■□□□□ 0.01
COPS7A-218ENST00000543939 PSG3Q16557 428 aa15.14■□□□□ 0.01
COPS7A-218ENST00000543939 DAZ1Q9NQZ3 744 aaKnown RBP15.14■□□□□ 0.01
COPS7A-218ENST00000543939 IGHV7-4-1A0A0J9YVY3 117 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 A0A1W2PS18 150 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 HLA-DMBP28068 263 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 FLI1Q01543 452 aaPredicted RBP15.13■□□□□ 0.01
COPS7A-218ENST00000543939 TM4SF20Q53R12 229 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 IGFL4Q6B9Z1 124 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 PRNTQ86SH4 94 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 TMEM183AQ8IXX5 376 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 GRAMD2BQ96HH9 432 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 PSG8Q9UQ74 426 aa15.13■□□□□ 0.01
COPS7A-218ENST00000543939 LOC105371267A0A1B0GV96 52 aa15.12■□□□□ 0.01
COPS7A-218ENST00000543939 RNASE1P07998 156 aaKnown RBP15.12■□□□□ 0.01
COPS7A-218ENST00000543939 SRD5A1P18405 259 aa15.12■□□□□ 0.01
COPS7A-218ENST00000543939 CHEK1O14757 476 aa15.12■□□□□ 0.01
COPS7A-218ENST00000543939 PRB4P10163 310 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms