RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 APOC4P55056 127 aa11.1□□□□□ -0.63
CD9-210ENST00000543916 ACOT6Q3I5F7 207 aaPredicted RBP11.1□□□□□ -0.63
CD9-210ENST00000543916 LCN15Q6UWW0 184 aa11.1□□□□□ -0.63
CD9-210ENST00000543916 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
CD9-210ENST00000543916 HRH4Q9H3N8 390 aa11.1□□□□□ -0.63
CD9-210ENST00000543916 ZNF331Q9NQX6 463 aaPredicted RBP11.1□□□□□ -0.63
CD9-210ENST00000543916 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
CD9-210ENST00000543916 AGRNO00468 2067 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 KIR2DL5BA0A0G2JN68 375 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 KIR2DL5BA0A0G2JPC4 375 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 F6UB75 175 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 EIF3GO75821 320 aaKnown RBP eCLIP11.09□□□□□ -0.63
CD9-210ENST00000543916 RHOBP62745 196 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 CD300CQ08708 224 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 KIR2DL5AQ8N109 375 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 KIR2DL5BQ8NHK3 375 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 LRRC20Q8TCA0 184 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 SAT2Q96F10 170 aaPredicted RBP11.09□□□□□ -0.63
CD9-210ENST00000543916 ARPC5LQ9BPX5 153 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 SPATA25Q9BR10 227 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 SAV1Q9H4B6 383 aaPredicted RBP11.09□□□□□ -0.63
CD9-210ENST00000543916 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 RPRMQ9NS64 109 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 TENM3Q9P273 2699 aa11.09□□□□□ -0.63
CD9-210ENST00000543916 A0A0D9SG52 128 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 H3BMM0 161 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 JTBO76095 146 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 GUK1Q16774 197 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 FAM122CQ6P4D5 195 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 FOXI2Q6ZQN5 318 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 OR10G4Q8NGN3 311 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 OR10G9Q8NGN4 311 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 OR10G7Q8NGN6 311 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 GNPNAT1Q96EK6 184 aaPredicted RBP11.08□□□□□ -0.64
CD9-210ENST00000543916 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 RCHY1Q96PM5 261 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
CD9-210ENST00000543916 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 A0A0J9YX75 114 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 BCL2L11O43521 198 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 C1QBP02746 253 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 PRB4P10163 310 aaPredicted RBP11.07□□□□□ -0.64
CD9-210ENST00000543916 HIST1H1EP10412 219 aaKnown RBP11.07□□□□□ -0.64
CD9-210ENST00000543916 SERF2P84101 59 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 PSG3Q16557 428 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 PAXXQ9BUH6 204 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 CSTL1Q9H114 145 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 OR51M1Q9H341 326 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 U3KQK5 164 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 NBEAL2Q6ZNJ1 2754 aa11.07□□□□□ -0.64
CD9-210ENST00000543916 UBE2CO00762 179 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 OR7C2O60412 319 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 ZNF253O75346 499 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 NDUFB4O95168 129 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 CA1P00915 261 aaPredicted RBP11.06□□□□□ -0.64
CD9-210ENST00000543916 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 GIG44P09565 113 aaPredicted RBP11.06□□□□□ -0.64
CD9-210ENST00000543916 OR10J4P0C629 311 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 C4BPBP20851 252 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 KHDC3LQ587J8 217 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 TMUB2Q71RG4 321 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 RPP25LQ8N5L8 163 aaKnown RBP11.06□□□□□ -0.64
CD9-210ENST00000543916 BLNKQ8WV28 456 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 RNF141Q8WVD5 230 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 FXYD5Q96DB9 178 aa11.06□□□□□ -0.64
CD9-210ENST00000543916 HUWE1Q7Z6Z7 4374 aaKnown RBP11.05□□□□□ -0.64
CD9-210ENST00000543916 A0A1W2PPV4 95 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 HMGB3O15347 200 aaKnown RBP11.05□□□□□ -0.64
CD9-210ENST00000543916 NBEAP1P0C6P0 100 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 ZNF705DP0CH99 300 aaPredicted RBP11.05□□□□□ -0.64
CD9-210ENST00000543916 ZNF705BP0CI00 300 aaPredicted RBP11.05□□□□□ -0.64
CD9-210ENST00000543916 SPP1P10451 314 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 TAS2R45P59539 299 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 LGALSLQ3ZCW2 172 aaPredicted RBP11.05□□□□□ -0.64
CD9-210ENST00000543916 TMEM41BQ5BJD5 291 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 Q6ZWC4 215 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
CD9-210ENST00000543916 A8MTW9 85 aa11.04□□□□□ -0.64
CD9-210ENST00000543916 ZNF705FA8MVS1 300 aaPredicted RBP11.04□□□□□ -0.64
CD9-210ENST00000543916 MBP02144 154 aa11.04□□□□□ -0.64
CD9-210ENST00000543916 CDC34P49427 236 aaPredicted RBP11.04□□□□□ -0.64
CD9-210ENST00000543916 UBE2L3P68036 154 aaKnown RBP11.04□□□□□ -0.64
CD9-210ENST00000543916 PDE6HQ13956 83 aa11.04□□□□□ -0.64
CD9-210ENST00000543916 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
CD9-210ENST00000543916 SSX7Q7RTT5 188 aa11.04□□□□□ -0.64
CD9-210ENST00000543916 OR4B1Q8NGF8 309 aa11.04□□□□□ -0.64
CD9-210ENST00000543916 RPUSD4Q96CM3 377 aaKnown RBP11.04□□□□□ -0.64
CD9-210ENST00000543916 PHYHIPLQ96FC7 376 aa11.04□□□□□ -0.64
CD9-210ENST00000543916 ZNF471Q9BX82 626 aaPredicted RBP11.04□□□□□ -0.64
CD9-210ENST00000543916 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 PFDN1O60925 122 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 OR8A1Q8NGG7 326 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms