RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 GAGE6Q13070 117 aa10.1□□□□□ -0.79
SMG8-202ENST00000543872 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.1□□□□□ -0.79
SMG8-202ENST00000543872 F8W1H4 67 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 CKS2P33552 79 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 FAM169BQ8N8A8 192 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 CCL13Q99616 98 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 IGLL5B9A064 214 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 ID1P41134 155 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 KIR2DL2P43627 348 aaPredicted RBP10.09□□□□□ -0.79
SMG8-202ENST00000543872 RPL32P62910 135 aaKnown RBP10.09□□□□□ -0.79
SMG8-202ENST00000543872 ANXA2RQ3ZCQ2 193 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 ORMDL3Q8N138 153 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 RALYQ9UKM9 306 aaKnown RBP10.09□□□□□ -0.79
SMG8-202ENST00000543872 CEP250Q9BV73 2442 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 SFTA2Q6UW10 78 aa10.09□□□□□ -0.79
SMG8-202ENST00000543872 TRBV25-1A0A075B6N4 114 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 J3KRW8 73 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 TNFRSF1AP19438 455 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 IGFBP4P22692 258 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 ZGRF1Q86YA3 2104 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 C17orf77Q96MU5 243 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 ZNF785A8K8V0 405 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 CGB3P0DN86 165 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 CGB7P0DN87 165 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 GP9P14770 177 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 OSR1Q8TAX0 266 aaPredicted RBP10.08□□□□□ -0.8
SMG8-202ENST00000543872 TNFRSF13BO14836 293 aaPredicted RBP10.08□□□□□ -0.8
SMG8-202ENST00000543872 NPYP01303 97 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 FAM216BQ8N7L0 139 aa10.08□□□□□ -0.8
SMG8-202ENST00000543872 ENSAO43768 121 aaKnown RBP10.07□□□□□ -0.8
SMG8-202ENST00000543872 MRPL51Q4U2R6 128 aaKnown RBP10.07□□□□□ -0.8
SMG8-202ENST00000543872 C6orf15Q6UXA7 325 aaPredicted RBP10.07□□□□□ -0.8
SMG8-202ENST00000543872 ZCCHC24Q8N2G6 241 aaKnown RBP10.07□□□□□ -0.8
SMG8-202ENST00000543872 TMEM160Q9NX00 188 aa10.07□□□□□ -0.8
SMG8-202ENST00000543872 SPRR3Q9UBC9 169 aa10.07□□□□□ -0.8
SMG8-202ENST00000543872 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
SMG8-202ENST00000543872 IGHV3-72A0A0B4J1Y9 119 aa10.07□□□□□ -0.8
SMG8-202ENST00000543872 CDIP1Q9H305 208 aa10.07□□□□□ -0.8
SMG8-202ENST00000543872 TPSG1Q9NRR2 321 aa10.07□□□□□ -0.8
SMG8-202ENST00000543872 DCHS1Q96JQ0 3298 aa10.07□□□□□ -0.8
SMG8-202ENST00000543872 TRGV5A0A0B4J1U4 118 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 PATE3B3GLJ2 98 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 E9PLD3 99 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 IGLV2-11P01706 119 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 XGP55808 180 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 DIAPH2-AS1Q14236 149 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 CEND1Q8N111 149 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 PHLDA1Q8WV24 401 aaPredicted RBP10.06□□□□□ -0.8
SMG8-202ENST00000543872 MRPS17Q9Y2R5 130 aaKnown RBP10.06□□□□□ -0.8
SMG8-202ENST00000543872 WNK2Q9Y3S1 2297 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 DSCAML1Q8TD84 2053 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 CGB1A6NKQ9 187 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 M0R3E3 92 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 OVOL3O00110 214 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 THAP8Q8NA92 274 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 C8orf49Q96NF6 230 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 FOXC2Q99958 501 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 RAB9BQ9NP90 201 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 OTORQ9NRC9 128 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 HIGD1AQ9Y241 93 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 PKDREJQ9NTG1 2253 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 APOMO95445 188 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 CRIP1P50238 77 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 C1QTNF4Q9BXJ3 329 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 LINC00312Q9Y6C7 94 aa10.06□□□□□ -0.8
SMG8-202ENST00000543872 CT45A10P0DMU9 189 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 LEPP41159 167 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 CXCL12P48061 93 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 TWIST1Q15672 202 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 MSMPQ1L6U9 139 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 TTC9CQ8N5M4 171 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 RPUSD1Q9UJJ7 312 aaKnown RBP10.05□□□□□ -0.8
SMG8-202ENST00000543872 A0A1W2PPI3 338 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 C12orf74Q32Q52 190 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 HIST1H4GQ99525 98 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 FAM90A27PA6NNH2 459 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 PRRG2O14669 202 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 RBP4P02753 201 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 ARL3P36405 182 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 FHL3Q13643 280 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 GLMPQ8WWB7 406 aa10.05□□□□□ -0.8
SMG8-202ENST00000543872 EVI2AP22794 236 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 MZT1Q08AG7 82 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 Q6ZUT4 128 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 TMEM178AQ8NBL3 297 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 CCL3L1P16619 93 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 C8orf46Q8TAG6 207 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 TM2D2Q9BX73 214 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 DMDP11532 3685 aa10.04□□□□□ -0.8
SMG8-202ENST00000543872 WI2-2373I1.2A0A1W2PRP0 233 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 IGKCP01834 107 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 MAPKAPK5-AS1Q8N8E1 139 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms