RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 TUBA4BQ9H853 241 aa7.28□□□□□ -1.24
VEGFB-204ENST00000543462 ZNF331Q9NQX6 463 aaPredicted RBP7.28□□□□□ -1.24
VEGFB-204ENST00000543462 ZNF586Q9NXT0 402 aa7.28□□□□□ -1.24
VEGFB-204ENST00000543462 FUT9Q9Y231 359 aa7.28□□□□□ -1.24
VEGFB-204ENST00000543462 HLA-DRB4X5D2U9 266 aa7.28□□□□□ -1.24
VEGFB-204ENST00000543462 DNAH7Q8WXX0 4024 aa7.28□□□□□ -1.24
VEGFB-204ENST00000543462 KNCNA6PVL3 124 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 H3BMM0 161 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 TAAR5O14804 337 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 ATF4P18848 351 aaPredicted RBP7.27□□□□□ -1.25
VEGFB-204ENST00000543462 M6PRP20645 277 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 C4BPBP20851 252 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 DEFB1P60022 68 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 RAB2AP61019 212 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 SNRPD3P62318 126 aaKnown RBP7.27□□□□□ -1.25
VEGFB-204ENST00000543462 FAM78BQ5VT40 261 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 FOXI2Q6ZQN5 318 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 HSD17B11Q8NBQ5 300 aa7.27□□□□□ -1.25
VEGFB-204ENST00000543462 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
VEGFB-204ENST00000543462 TRBV19A0A075B6N1 114 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 A0A0J9YX75 114 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 BCL2L11O43521 198 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 PYYP10082 97 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 HIST1H1EP10412 219 aaKnown RBP7.26□□□□□ -1.25
VEGFB-204ENST00000543462 HLA-DMBP28068 263 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 SERF2P84101 59 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 PDE6HQ13956 83 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 GUK1Q16774 197 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 ZFP69Q49AA0 526 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 AMTNQ6UX39 209 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 RPP25LQ8N5L8 163 aaKnown RBP7.26□□□□□ -1.25
VEGFB-204ENST00000543462 RNF182Q8N6D2 247 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 C16orf92Q96LL3 132 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 SLC50A1Q9BRV3 221 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 RETNQ9HD89 108 aa7.26□□□□□ -1.25
VEGFB-204ENST00000543462 A0A0D9SG52 128 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 F6UB75 175 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 UBE2CO00762 179 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 JTBO76095 146 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 SPP1P10451 314 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 RPL35AP18077 110 aaKnown RBP7.25□□□□□ -1.25
VEGFB-204ENST00000543462 ID1P41134 155 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 APOC4P55056 127 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 RHOBP62745 196 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 LGALSLQ3ZCW2 172 aaPredicted RBP7.25□□□□□ -1.25
VEGFB-204ENST00000543462 ACTL10Q5JWF8 245 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 Q6ZWC4 215 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 SSX7Q7RTT5 188 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 SUN5Q8TC36 379 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 GNPNAT1Q96EK6 184 aaPredicted RBP7.25□□□□□ -1.25
VEGFB-204ENST00000543462 ARPC5LQ9BPX5 153 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 SPATA25Q9BR10 227 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 OVOL2Q9BRP0 275 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 PLA2G2EQ9NZK7 142 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 TP53TG1Q9Y2A0 90 aa7.25□□□□□ -1.25
VEGFB-204ENST00000543462 BORCS7-ASMTA0A0B4J1R7 106 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 H3BTX0 84 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 EIF3GO75821 320 aaKnown RBP eCLIP7.24□□□□□ -1.25
VEGFB-204ENST00000543462 SNRPCP09234 159 aaKnown RBP7.24□□□□□ -1.25
VEGFB-204ENST00000543462 STAG3L2P0CL84 134 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 STAG3L3P0CL85 134 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 ZNF726P1Q15940 193 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 PSG3Q16557 428 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 ACOT6Q3I5F7 207 aaPredicted RBP7.24□□□□□ -1.25
VEGFB-204ENST00000543462 TMUB2Q71RG4 321 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 STOML3Q8TAV4 291 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 MRPL53Q96EL3 112 aaKnown RBP7.24□□□□□ -1.25
VEGFB-204ENST00000543462 PHYHIPLQ96FC7 376 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 HYLS1Q96M11 299 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 RCHY1Q96PM5 261 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 RPRMQ9NS64 109 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 U3KQK5 164 aa7.24□□□□□ -1.25
VEGFB-204ENST00000543462 RGS13O14921 159 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 CDC34P49427 236 aaPredicted RBP7.23□□□□□ -1.25
VEGFB-204ENST00000543462 KHDC3LQ587J8 217 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 TMEM41BQ5BJD5 291 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 MORN3Q6PF18 240 aaPredicted RBP7.23□□□□□ -1.25
VEGFB-204ENST00000543462 STHQ8IWL8 128 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 C9orf62Q8N4C0 152 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 OR10G4Q8NGN3 311 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 OR10G9Q8NGN4 311 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 OR10G7Q8NGN6 311 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 RNF183Q96D59 192 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 LINC00052Q96N35 136 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 PAXXQ9BUH6 204 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 CSTL1Q9H114 145 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 OR51M1Q9H341 326 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 EDA2RQ9HAV5 297 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 CLEC5AQ9NY25 188 aa7.23□□□□□ -1.25
VEGFB-204ENST00000543462 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 MBP02144 154 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 OR10J4P0C629 311 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 NBEAP1P0C6P0 100 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 CNN1P51911 297 aaKnown RBP7.22□□□□□ -1.25
VEGFB-204ENST00000543462 DEFB135Q30KP9 77 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 FAM122CQ6P4D5 195 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 PQLC2Q6ZP29 291 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 OR8A1Q8NGG7 326 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms