RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 F11RQ9Y624 299 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 DIRC3C9JPN6 131 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 IGLV1-44P01699 117 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 PSG1P11464 419 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 ATP5G3P48201 142 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 ZNF506Q5JVG8 444 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 VN1R17PQ8TDU5 208 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 KLF2Q9Y5W3 355 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 RPL35AP18077 110 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 SLC25A39Q9BZJ4 359 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 RPP21Q9H633 154 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 NUP210Q8TEM1 1887 aaPredicted RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 HEATR5AQ86XA9 2040 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 A0A1B0GWB2 263 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 A6NDN8 102 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 GYPEP15421 78 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 RPL32P62910 135 aaKnown RBP5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 PAX2Q02962 417 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 TMEM136Q6ZRR5 245 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 KIR3DL3Q8N743 410 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 WFDC12Q8WWY7 111 aa5.61□□□□□ -1.51
SRGAP1-206ENST00000543397 NPSP0C0P6 89 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 GRNP28799 593 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 SYNJ2BPP57105 145 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 Q6ZR03 302 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 C9orf139Q6ZV77 190 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 C14orf144Q96I85 54 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 IGF2RP11717 2491 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 IGLV3-9A0A075B6K5 115 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 TRBV9A0A0B4J1U6 114 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 A0A1W2PRE2 83 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 OVOL3O00110 214 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 FOXA3P55318 350 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 DEFB113Q30KQ7 82 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 OR11H1Q8NG94 326 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 OR11H2Q8NH07 326 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 RAB37Q96AX2 223 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 PRELID3AQ96N28 172 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 SSBP4Q9BWG4 385 aaPredicted RBP5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 A0A087WWL8 130 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 hDV102S1A0JD36 115 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 CRPP02741 224 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 ZNF134P52741 427 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 DAZ1Q9NQZ3 744 aaKnown RBP5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 EPDR1Q9UM22 224 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 PSG8Q9UQ74 426 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 LINC00473A8K010 186 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 PMS2P5A8MQ11 134 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 TRGC2P03986 189 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 COX6CP09669 75 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 NDPQ00604 133 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 ACTL10Q5JWF8 245 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 LHFPL1Q86WI0 220 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 TMEM126AQ9H061 195 aa5.6□□□□□ -1.51
SRGAP1-206ENST00000543397 PSG3Q16557 428 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 ADAMTSL5Q6ZMM2 481 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 RHPN1-AS1Q9BWJ2 59 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 LAMTOR2Q9Y2Q5 125 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 ESDP10768 282 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 LOXP28300 417 aaPredicted RBP5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 VGLL1Q99990 258 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 TOMM7Q9P0U1 55 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 TRAV3A0A0B4J244 114 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 TMEM170BQ5T4T1 132 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 CD164L2Q6UWJ8 174 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 TREML4Q6UXN2 200 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 TMEM183AQ8IXX5 376 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 RBMY1BA6NDE4 496 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 RBMY1EA6NEQ0 496 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 NDUFS7O75251 213 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 IGKV1-16P04430 117 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 RBMY1DP0C7P1 496 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 RBMY1A1P0DJD3 496 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 TRGV9Q99603 122 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 MRPL16Q9NX20 251 aaKnown RBP5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 PLCE1Q9P212 2302 aa5.59□□□□□ -1.51
SRGAP1-206ENST00000543397 HELZP42694 1942 aaKnown RBP5.59□□□□□ -1.52
SRGAP1-206ENST00000543397 A0A087WX48 190 aa5.59□□□□□ -1.52
SRGAP1-206ENST00000543397 RNF222A6NCQ9 220 aa5.59□□□□□ -1.52
SRGAP1-206ENST00000543397 ATP6V0E1O15342 81 aa5.59□□□□□ -1.52
SRGAP1-206ENST00000543397 BRK1Q8WUW1 75 aa5.59□□□□□ -1.52
SRGAP1-206ENST00000543397 CHCHD5Q9BSY4 110 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 SCRT1Q9BWW7 348 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 WIPF3A6NGB9 483 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 SRRM4A7MD48 611 aaKnown RBP5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 LMO1P25800 156 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 HINT1P49773 126 aaPredicted RBP5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 CCL20P78556 96 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 FHL1Q13642 323 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 NAV2Q8IVL1 2488 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 ZNF503-AS2A6NEH8 195 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 E9PQ18 207 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 H3BRM9 83 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 IGKV1-5P01602 117 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 Q6ZS49 121 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 FANCD2OSQ96PS1 177 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 PRADC1Q9BSG0 188 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 GGTLC1Q9BX51 225 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 MED13Q9UHV7 2174 aa5.58□□□□□ -1.52
SRGAP1-206ENST00000543397 H7C2G1 150 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms