RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 SS18Q15532 418 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 MRAPQ8TCY5 172 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 PRSS22Q9GZN4 317 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 CYTL1Q9NRR1 136 aa15.96■□□□□ 0.15
HDAC4-215ENST00000543185 NABP1Q96AH0 204 aa15.96■□□□□ 0.14
HDAC4-215ENST00000543185 DSCR8Q96T75 97 aa15.96■□□□□ 0.14
HDAC4-215ENST00000543185 DSCAMO60469 2012 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 NDUFC2O95298 119 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 ZNF883P0CG24 379 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 FAM223BA6NKX1 122 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 C6orf226Q5I0X4 101 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 PRIMA1Q86XR5 153 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 FAM223AQ8IWN6 122 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 ACYP1P07311 99 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 RPUSD1Q9UJJ7 312 aaKnown RBP15.95■□□□□ 0.14
HDAC4-215ENST00000543185 ANAPC10Q9UM13 185 aa15.95■□□□□ 0.14
HDAC4-215ENST00000543185 RCHY1Q96PM5 261 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 A0A1W2PPM0 123 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 SNHG12Q9BXW3 62 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 SRRM4A7MD48 611 aaKnown RBP15.94■□□□□ 0.14
HDAC4-215ENST00000543185 K7EMI3 77 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 CDCP2Q5VXM1 449 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 RFNGQ9Y644 331 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 MUC4Q99102 2169 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 MINOS1Q5TGZ0 78 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 MINOS1-NBL1R4GNA1 71 aa15.94■□□□□ 0.14
HDAC4-215ENST00000543185 COLCA1Q6ZS62 124 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 FCN3O75636 299 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 STPG1Q5TH74 334 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 TRPT1Q86TN4 253 aaKnown RBP15.93■□□□□ 0.14
HDAC4-215ENST00000543185 NUP210LQ5VU65 1888 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 LCN12Q6JVE5 192 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 SH2D1AO60880 128 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 COX8AP10176 69 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 EXOC3-AS1Q8N2X6 119 aa15.93■□□□□ 0.14
HDAC4-215ENST00000543185 CFPP27918 469 aa15.92■□□□□ 0.14
HDAC4-215ENST00000543185 LSM4Q9Y4Z0 139 aaKnown RBP15.92■□□□□ 0.14
HDAC4-215ENST00000543185 TRAV13-2A0A0B4J235 113 aa15.92■□□□□ 0.14
HDAC4-215ENST00000543185 NCR2O95944 276 aa15.92■□□□□ 0.14
HDAC4-215ENST00000543185 S4R3C0 116 aa15.92■□□□□ 0.14
HDAC4-215ENST00000543185 ZNF492Q9P255 531 aa15.92■□□□□ 0.14
HDAC4-215ENST00000543185 POLR3KQ9Y2Y1 108 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-215ENST00000543185 WNT2P09544 360 aa15.92■□□□□ 0.14
HDAC4-215ENST00000543185 PRR19A6NJB7 356 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 PPP1R32Q7Z5V6 425 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 GAGE12JA6NER3 117 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 GAGE7O76087 117 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 GAGE12FP0CL80 117 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 GAGE12GP0CL81 117 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 GAGE12IP0CL82 117 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 GAGE4Q13068 117 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 SIGLEC12Q96PQ1 595 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 IGKV1-9A0A0C4DH69 117 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 RHODO00212 210 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 IGKV2-40A0A087WW87 121 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-215ENST00000543185 IGKV2D-40P01614 121 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-215ENST00000543185 PAQR4Q8N4S7 273 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-215ENST00000543185 INS-IGF2F8WCM5 200 aa15.91■□□□□ 0.14
HDAC4-215ENST00000543185 ZNF329Q86UD4 541 aa15.9■□□□□ 0.14
HDAC4-215ENST00000543185 GLMPQ8WWB7 406 aa15.9■□□□□ 0.14
HDAC4-215ENST00000543185 ATG2AQ2TAZ0 1938 aa15.9■□□□□ 0.14
HDAC4-215ENST00000543185 Q86TA4 180 aa15.9■□□□□ 0.14
HDAC4-215ENST00000543185 H3BQ85 93 aa15.9■□□□□ 0.14
HDAC4-215ENST00000543185 CDKN1BP46527 198 aa15.9■□□□□ 0.14
HDAC4-215ENST00000543185 NPC2P61916 151 aa15.9■□□□□ 0.14
HDAC4-215ENST00000543185 A0A0A6YYD4 124 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 IGHV1-2P23083 117 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 NDUFB8O95169 186 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 ZNF876PQ49A33 203 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 TMEM126AQ9H061 195 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 SRRM5B3KS81 715 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 PRSS46E5RG02 174 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 DMRTC2Q8IXT2 367 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-215ENST00000543185 TRAV41A0A0B4J266 112 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 LIME1Q9H400 295 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 C7orf69Q9H7B7 122 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 PRO1854Q9UHT4 67 aa15.89■□□□□ 0.13
HDAC4-215ENST00000543185 C10orf91Q5T1B1 145 aa15.88■□□□□ 0.13
HDAC4-215ENST00000543185 VSIRQ9H7M9 311 aa15.88■□□□□ 0.13
HDAC4-215ENST00000543185 EXPH5Q8NEV8 1989 aa15.88■□□□□ 0.13
HDAC4-215ENST00000543185 CEND1Q8N111 149 aa15.88■□□□□ 0.13
HDAC4-215ENST00000543185 NAA38Q9BRA0 125 aaKnown RBP15.88■□□□□ 0.13
HDAC4-215ENST00000543185 EGR2P11161 476 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-215ENST00000543185 HGFACQ04756 655 aa15.87■□□□□ 0.13
HDAC4-215ENST00000543185 SPAARA0A1B0GVQ0 90 aa15.87■□□□□ 0.13
HDAC4-215ENST00000543185 TNRC6BQ9UPQ9 1833 aaKnown RBP15.87■□□□□ 0.13
HDAC4-215ENST00000543185 AZU1P20160 251 aa15.87■□□□□ 0.13
HDAC4-215ENST00000543185 C18orf32Q8TCD1 76 aa15.87■□□□□ 0.13
HDAC4-215ENST00000543185 IGKV1D-43A0A0B4J1Z2 117 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 I3L3M4 83 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 EREGO14944 169 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 RFPL3SP0C7P2 107 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 IGHV2-26A0A0B4J1V2 119 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 TSSC4Q9Y5U2 329 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-215ENST00000543185 GFI1Q99684 422 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 KLHDC3Q9BQ90 382 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 CELA3BP08861 270 aa15.86■□□□□ 0.13
HDAC4-215ENST00000543185 IGLV3-12A0A075B6K2 115 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 A0A0U1RRA0 63 aa15.85■□□□□ 0.13
HDAC4-215ENST00000543185 DSCR9P59020 149 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms