RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 IMUPQ9GZP8 106 aa0.1□□□□□ -2.39
KNTC1-213ENST00000542727 TCEAL2Q9H3H9 227 aaPredicted RBP0.1□□□□□ -2.39
KNTC1-213ENST00000542727 NMNAT1Q9HAN9 279 aaPredicted RBP0.1□□□□□ -2.39
KNTC1-213ENST00000542727 PARVGQ9HBI0 331 aa0.1□□□□□ -2.39
KNTC1-213ENST00000542727 ARL5AQ9Y689 179 aa0.1□□□□□ -2.39
KNTC1-213ENST00000542727 MIA2Q96PC5 1412 aa0.1□□□□□ -2.39
KNTC1-213ENST00000542727 ERBINQ96RT1 1412 aa0.1□□□□□ -2.39
KNTC1-213ENST00000542727 RBBP6Q7Z6E9 1792 aaKnown RBP0.09□□□□□ -2.39
KNTC1-213ENST00000542727 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.39
KNTC1-213ENST00000542727 AFDNP55196 1824 aaKnown RBP0.09□□□□□ -2.39
KNTC1-213ENST00000542727 KIAA1549LQ6ZVL6 1849 aa0.09□□□□□ -2.39
KNTC1-213ENST00000542727 C9orf170A2RU37 121 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 FAM159BA6NKW6 160 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 ZNF727A8MUV8 499 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 SERPINA1P01009 418 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 IGLV1-51P01701 117 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 NFYBP25208 207 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 RAB5CP51148 216 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 FOXA3P55318 350 aaPredicted RBP0.09□□□□□ -2.4
KNTC1-213ENST00000542727 VBP1P61758 197 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 SPINK6Q6UWN8 80 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 ARPINQ7Z6K5 226 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 ATOH7Q8N100 152 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 C9orf16Q9BUW7 83 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 HSPB8Q9UJY1 196 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 SLC22A13Q9Y226 551 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 BCL9O00512 1426 aa0.09□□□□□ -2.4
KNTC1-213ENST00000542727 NUP210Q8TEM1 1887 aaPredicted RBP0.09□□□□□ -2.4
KNTC1-213ENST00000542727 K7ERJ3 54 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 GPR31O00270 319 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 CRHP06850 196 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 NCALDP61601 193 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 QRFPP83859 136 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 EIF3IQ13347 325 aaKnown RBP0.08□□□□□ -2.4
KNTC1-213ENST00000542727 PATE2Q6UY27 113 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 Q6ZQY7 126 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 LRRC18Q8N456 261 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 DGCR14Q96DF8 476 aaKnown RBP0.08□□□□□ -2.4
KNTC1-213ENST00000542727 ZHX1-C8orf76Q96EF9 292 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 HYLS1Q96M11 299 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 CCDC94Q9BW85 323 aaPredicted RBP0.08□□□□□ -2.4
KNTC1-213ENST00000542727 PARVBQ9HBI1 364 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 ARL2BPQ9Y2Y0 163 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 TRPM1Q7Z4N2 1603 aa0.08□□□□□ -2.4
KNTC1-213ENST00000542727 MYH1P12882 1939 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 PTPRZ1P23471 2315 aaPredicted RBP0.07□□□□□ -2.4
KNTC1-213ENST00000542727 A0A087WSZ3 146 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 A0A096LPI6 279 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 hDV103S1A0JD37 113 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 CXCL1P09341 107 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 TMBIM6P55061 237 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 ARPP19P56211 112 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 FXYD4P59646 89 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 CCL7P80098 99 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 KLRD1Q13241 179 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 RGS21Q2M5E4 152 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 OCIAD2Q56VL3 154 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 OR10AG1Q8NH19 301 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 PRAP1Q96NZ9 151 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 PHB2Q99623 299 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 LIMD2Q9BT23 127 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 POPDC3Q9HBV1 291 aa0.07□□□□□ -2.4
KNTC1-213ENST00000542727 BOKQ9UMX3 212 aaPredicted RBP0.07□□□□□ -2.4
KNTC1-213ENST00000542727 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.07□□□□□ -2.4
KNTC1-213ENST00000542727 RFX7Q2KHR2 1363 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 SYNE1Q8NF91 8797 aaKnown RBP0.06□□□□□ -2.4
KNTC1-213ENST00000542727 ADGBQ8N7X0 1667 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 NCAPD3P42695 1498 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 TRAV27A0A087WT01 109 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 ODAMA1E959 279 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 G3V2T6 193 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 CST2P09228 141 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 CYBAP13498 195 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 RPL37AP61513 92 aaKnown RBP0.06□□□□□ -2.4
KNTC1-213ENST00000542727 PXT1Q8NFP0 134 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 PPTC7Q8NI37 304 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 TEX37Q96LM6 180 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 MAP1LC3BQ9GZQ8 125 aa0.06□□□□□ -2.4
KNTC1-213ENST00000542727 DUXBA0A1W2PPF3 345 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 RER1O15258 196 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 NDUFC2O95298 119 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 CCL4P13236 92 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 INSL3P51460 131 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 SNCBQ16143 134 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 PLAC4Q8WY50 150 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 CCL19Q99731 98 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 OR2J1Q9GZK6 312 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 CACYBPQ9HB71 228 aaKnown RBP0.05□□□□□ -2.4
KNTC1-213ENST00000542727 ARMC1Q9NVT9 282 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 FRMPD1Q5SYB0 1578 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 IGF2RP11717 2491 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 USP54Q70EL1 1684 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 CTTNBP2Q8WZ74 1663 aa0.05□□□□□ -2.4
KNTC1-213ENST00000542727 ADGRL3Q9HAR2 1447 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 LYRM1O43325 122 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 CD3DP04234 171 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 IFNA4P05014 189 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 ERVS71-1P61550 626 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 HSPE1P61604 102 aaKnown RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms