RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 RBM38Q9H0Z9 239 aaKnown RBP5.13□□□□□ -1.59
DMD-228ENST00000541735 SIPA1L3O60292 1781 aaPredicted RBP5.13□□□□□ -1.59
DMD-228ENST00000541735 NDUFS8O00217 210 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 C9orf66Q5T8R8 295 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 RNF144BQ7Z419 303 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 RCC1LQ96I51 464 aaKnown RBP5.13□□□□□ -1.59
DMD-228ENST00000541735 MEGF9Q9H1U4 602 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 PLSCR4Q9NRQ2 329 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 COX11Q9Y6N1 276 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 PQLC2LA1A4F0 135 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 FSTP19883 344 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 MRPS18AQ9NVS2 196 aaKnown RBP5.13□□□□□ -1.59
DMD-228ENST00000541735 IL36BQ9NZH7 164 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 PCNX2A6NKB5 2137 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 LAMB2P55268 1798 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 LIMS1P48059 325 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 UCP3P55916 312 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 DEFB135Q30KP9 77 aa5.13□□□□□ -1.59
DMD-228ENST00000541735 COL11A1P12107 1806 aaPredicted RBP5.12□□□□□ -1.59
DMD-228ENST00000541735 Q8NFD4 153 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 PROP1O75360 226 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 HLA-DQB1P01920 261 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 GAS1P54826 345 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 ZNF497Q6ZNH5 498 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 LYPD6BQ8NI32 183 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 FAM110AQ9BQ89 295 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 INAFM1C9JVW0 142 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 M0R1W7 72 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 IL18BPO95998 194 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 CTSGP08311 255 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 GAFA1Q96PS6 74 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 TIMM21Q9BVV7 248 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 CLDN16Q9Y5I7 305 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 QSER1Q2KHR3 1735 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 ARAP2Q8WZ64 1704 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 TINCRA0A1B0GVN0 87 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 SMIM10L1P0DMW3 83 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 PCP4P48539 62 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 NPBQ8NG41 125 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 SMIM10Q96HG1 83 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 TMEM243Q9BU79 118 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 SCN5AQ14524 2016 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 COL18A1P39060 1754 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 NTN3O00634 580 aaPredicted RBP5.12□□□□□ -1.59
DMD-228ENST00000541735 SPRY2O43597 315 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 ZNF660Q6AZW8 331 aaPredicted RBP5.12□□□□□ -1.59
DMD-228ENST00000541735 RETNQ9HD89 108 aa5.12□□□□□ -1.59
DMD-228ENST00000541735 PKDREJQ9NTG1 2253 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 hDV102S1A0JD36 115 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 CRLF1O75462 422 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 TRAV26-2A0A0B4J265 109 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 IZUMO1RA6ND01 250 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 TMEM242Q9NWH2 141 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 SPTAN1Q13813 2472 aaKnown RBP5.11□□□□□ -1.59
DMD-228ENST00000541735 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.11□□□□□ -1.59
DMD-228ENST00000541735 TRBV5-5A0A0J9YX44 114 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 PRR25Q96S07 402 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 CITED1Q99966 193 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 NDUFAF3Q9BU61 184 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 EIF4EBP2Q13542 120 aaPredicted RBP5.11□□□□□ -1.59
DMD-228ENST00000541735 SEM1Q6ZVN7 128 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 LIME1Q9H400 295 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 IGHV4-30-2A0A087WSY4 118 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 ETDCA0A1B0GVM5 59 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 PIN1P1O15428 100 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 CD5P06127 495 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 CRYGSP22914 178 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 DUTP33316 252 aaKnown RBP5.11□□□□□ -1.59
DMD-228ENST00000541735 STPG2Q8N412 459 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 A0A1B0GW64 132 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 GATA3P23771 443 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 ARTNQ5T4W7 220 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 Q6ZS92 163 aa5.11□□□□□ -1.59
DMD-228ENST00000541735 PHF3Q92576 2039 aaKnown RBP5.1□□□□□ -1.59
DMD-228ENST00000541735 IGHV2-70DA0A0C4DH43 119 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 ADMP35318 185 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 SCN4AP35499 1836 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.1□□□□□ -1.59
DMD-228ENST00000541735 FAM90A2PQ658T7 463 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 MARF1Q9Y4F3 1742 aaKnown RBP5.1□□□□□ -1.59
DMD-228ENST00000541735 IGKV1-27A0A075B6S5 117 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 TMEM238C9JI98 176 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 H0YJW9 148 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 GREM1O60565 184 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 ANKRD39Q53RE8 183 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 GTSF1LQ9H1H1 148 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 A0A087WV48 116 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 LINC00587B1AMM8 73 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 ARMS2P0C7Q2 107 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 SLC25A48Q6ZT89 311 aaKnown RBP5.1□□□□□ -1.59
DMD-228ENST00000541735 C9orf62Q8N4C0 152 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 SMAD5-AS1Q9Y6J3 95 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 PLXNA1Q9UIW2 1896 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 A0A1B0GWJ7 208 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 F2Z2F3 143 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 SPINK8P0C7L1 97 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 GYPEP15421 78 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 C9orf139Q6ZV77 190 aa5.1□□□□□ -1.59
DMD-228ENST00000541735 C5orf38Q86SI9 138 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms