RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PPP1R27Q86WC6 154 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 TMEM116Q8NCL8 245 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 PGLYRP4Q96LB8 373 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 CELSR1Q9NYQ6 3014 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 IGHV2-70DA0A0C4DH43 119 aa13.53□□□□□ -0.24
SPIDR-227ENST00000541342 TCRAP04437 139 aa13.53□□□□□ -0.24
SPIDR-227ENST00000541342 ORAOV1Q8WV07 137 aa13.53□□□□□ -0.24
SPIDR-227ENST00000541342 CCL19Q99731 98 aa13.53□□□□□ -0.24
SPIDR-227ENST00000541342 CT83Q5H943 113 aa13.53□□□□□ -0.24
SPIDR-227ENST00000541342 C5orf17Q8NAS9 161 aa13.53□□□□□ -0.24
SPIDR-227ENST00000541342 Q9H3A6 140 aa13.53□□□□□ -0.24
SPIDR-227ENST00000541342 TRAV8-1A0A0A6YYK1 113 aa13.52□□□□□ -0.24
SPIDR-227ENST00000541342 GOSR1O95249 250 aa13.52□□□□□ -0.24
SPIDR-227ENST00000541342 FMC1Q96HJ9 113 aa13.52□□□□□ -0.24
SPIDR-227ENST00000541342 TMEM70Q9BUB7 260 aa13.52□□□□□ -0.24
SPIDR-227ENST00000541342 ZNF492Q9P255 531 aa13.52□□□□□ -0.24
SPIDR-227ENST00000541342 ABCA2Q9BZC7 2435 aa13.52□□□□□ -0.25
SPIDR-227ENST00000541342 ZNF785A8K8V0 405 aa13.52□□□□□ -0.25
SPIDR-227ENST00000541342 IGLV2-11P01706 119 aa13.52□□□□□ -0.25
SPIDR-227ENST00000541342 CEACAM3P40198 252 aa13.52□□□□□ -0.25
SPIDR-227ENST00000541342 RPL27AP46776 148 aaKnown RBP13.52□□□□□ -0.25
SPIDR-227ENST00000541342 RNF5Q99942 180 aa13.52□□□□□ -0.25
SPIDR-227ENST00000541342 SPOCK3Q9BQ16 436 aa13.52□□□□□ -0.25
SPIDR-227ENST00000541342 C20orf202A1L168 122 aa13.51□□□□□ -0.25
SPIDR-227ENST00000541342 P01737 135 aa13.51□□□□□ -0.25
SPIDR-227ENST00000541342 APOHP02749 345 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-227ENST00000541342 SRSF1Q07955 248 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPIDR-227ENST00000541342 A8MWL6 223 aa13.51□□□□□ -0.25
SPIDR-227ENST00000541342 NPIPB6E9PJ23 425 aa13.51□□□□□ -0.25
SPIDR-227ENST00000541342 COX11Q9Y6N1 276 aa13.51□□□□□ -0.25
SPIDR-227ENST00000541342 TEX22C9J3V5 150 aa13.51□□□□□ -0.25
SPIDR-227ENST00000541342 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
SPIDR-227ENST00000541342 OR4C46A6NHA9 309 aa13.5□□□□□ -0.25
SPIDR-227ENST00000541342 TOX4O94842 621 aa13.5□□□□□ -0.25
SPIDR-227ENST00000541342 PLP1P60201 277 aa13.5□□□□□ -0.25
SPIDR-227ENST00000541342 RBPMS2Q6ZRY4 209 aaKnown RBP13.5□□□□□ -0.25
SPIDR-227ENST00000541342 Q86TA4 180 aa13.5□□□□□ -0.25
SPIDR-227ENST00000541342 CIARTQ8N365 385 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-227ENST00000541342 SYS1-DBNDD2H3BUS1 97 aa13.49□□□□□ -0.25
SPIDR-227ENST00000541342 FBN2P35556 2912 aa13.49□□□□□ -0.25
SPIDR-227ENST00000541342 GFRA4Q9GZZ7 299 aa13.49□□□□□ -0.25
SPIDR-227ENST00000541342 C1RLQ9NZP8 487 aa13.49□□□□□ -0.25
SPIDR-227ENST00000541342 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-227ENST00000541342 LOC102724200A0A096LPH7 203 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-227ENST00000541342 ZNF138P52744 262 aa13.49□□□□□ -0.25
SPIDR-227ENST00000541342 CHCHD1Q96BP2 118 aaKnown RBP13.49□□□□□ -0.25
SPIDR-227ENST00000541342 SOX21Q9Y651 276 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-227ENST00000541342 C16orf54Q6UWD8 224 aa13.48□□□□□ -0.25
SPIDR-227ENST00000541342 EXOC3-AS1Q8N2X6 119 aa13.48□□□□□ -0.25
SPIDR-227ENST00000541342 SRSF12Q8WXF0 261 aaKnown RBP13.48□□□□□ -0.25
SPIDR-227ENST00000541342 AJUBAQ96IF1 538 aa13.48□□□□□ -0.25
SPIDR-227ENST00000541342 hDV102S1A0JD36 115 aa13.48□□□□□ -0.25
SPIDR-227ENST00000541342 NBR2O15453 112 aa13.48□□□□□ -0.25
SPIDR-227ENST00000541342 PLGLAQ15195 96 aa13.48□□□□□ -0.25
SPIDR-227ENST00000541342 PSG1P11464 419 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 NPBQ8NG41 125 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 NDUFA3O95167 84 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 IGLC1P0CG04 106 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 MINOS1Q5TGZ0 78 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 NRGNQ92686 78 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 MINOS1-NBL1R4GNA1 71 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 IGHV4-61A0A0C4DH41 118 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 PRB4P10163 310 aaPredicted RBP13.47□□□□□ -0.25
SPIDR-227ENST00000541342 C10orf105Q8TEF2 133 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 NDFIP1Q9BT67 221 aa13.47□□□□□ -0.25
SPIDR-227ENST00000541342 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
SPIDR-227ENST00000541342 PTTG1IPP53801 180 aa13.46□□□□□ -0.25
SPIDR-227ENST00000541342 HES1Q14469 280 aa13.46□□□□□ -0.25
SPIDR-227ENST00000541342 ASCL2Q99929 193 aa13.46□□□□□ -0.25
SPIDR-227ENST00000541342 MCRIP2Q9BUT9 160 aaKnown RBP13.46□□□□□ -0.25
SPIDR-227ENST00000541342 LEPROTL1O95214 131 aa13.46□□□□□ -0.25
SPIDR-227ENST00000541342 UBE2V1Q13404 147 aa13.46□□□□□ -0.25
SPIDR-227ENST00000541342 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
SPIDR-227ENST00000541342 PIMREGQ9BSJ6 248 aa13.46□□□□□ -0.25
SPIDR-227ENST00000541342 SLC25A39Q9BZJ4 359 aaPredicted RBP13.46□□□□□ -0.25
SPIDR-227ENST00000541342 HIGD1AQ9Y241 93 aa13.46□□□□□ -0.25
SPIDR-227ENST00000541342 UBE2E1P51965 193 aa13.46□□□□□ -0.26
SPIDR-227ENST00000541342 LYZP61626 148 aa13.46□□□□□ -0.26
SPIDR-227ENST00000541342 C22orf15Q8WYQ4 148 aa13.46□□□□□ -0.26
SPIDR-227ENST00000541342 OTORQ9NRC9 128 aa13.46□□□□□ -0.26
SPIDR-227ENST00000541342 FAM231BA6NCW3 169 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 ATP5J2P56134 94 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 CCDC144NLQ6NUI1 221 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 GOLT1AQ6ZVE7 132 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 ST20Q9HBF5 79 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 HAX1O00165 279 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 COL8A1P27658 744 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 MPV17L2Q567V2 206 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 Q8N6K4 173 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 ZNF738Q8NE65 137 aa13.45□□□□□ -0.26
SPIDR-227ENST00000541342 OOSP1A8MZH6 123 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 PRNTQ86SH4 94 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 DAZAP1Q96EP5 407 aaKnown RBP13.44□□□□□ -0.26
SPIDR-227ENST00000541342 C17orf77Q96MU5 243 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 CBY1Q9Y3M2 126 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 LRRK2Q5S007 2527 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 I3L2K1 104 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 ZC2HC1AQ96GY0 325 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms