RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 MINOS1-NBL1R4GNA1 71 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 ASXL3Q9C0F0 2248 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 INAFM2P0DMQ5 153 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 ZNF876PQ49A33 203 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 TIMM21Q9BVV7 248 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-207ENST00000541122 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 IGHV2-70DA0A0C4DH43 119 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 CDPF1Q6NVV7 123 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 PTPRDP23468 1912 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 ADARB2-AS1A8MUL3 147 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 WNT2P09544 360 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 CFHR2P36980 270 aa12.13□□□□□ -0.47
SMARCA4-207ENST00000541122 CSRP1P21291 193 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 C5orf64Q2M2E5 130 aa12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 ESPL1Q14674 2120 aa12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 CEND1Q8N111 149 aa12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 LSM4Q9Y4Z0 139 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 LINC00158P58513 81 aa12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 HIST1H4AP62805 103 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
SMARCA4-207ENST00000541122 TRAV8-3A0A0A6YYJ7 113 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 TRAV41A0A0B4J266 112 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 AZU1P20160 251 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 TET1Q8NFU7 2136 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 TSC2P49815 1807 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 C14orf178Q8N769 122 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 NDUFA4L2Q9NRX3 87 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 TMEM213A2RRL7 107 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 LEPROTO15243 131 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 IFITM1P13164 125 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 MALP21145 153 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 CCL19Q99731 98 aa12.11□□□□□ -0.47
SMARCA4-207ENST00000541122 MLANAQ16655 118 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 ICE1Q9Y2F5 2266 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 WIPF3A6NGB9 483 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 LINC00205P59089 165 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 RCHY1Q96PM5 261 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 VGLL1Q99990 258 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 TRBV19A0A075B6N1 114 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 A0A1W2PPI3 338 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 IGLV3-1P01715 115 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 COX6B1P14854 86 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 CD24P25063 80 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 MRPL51Q4U2R6 128 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
SMARCA4-207ENST00000541122 SRRM4A7MD48 611 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 ZNF688P0C7X2 276 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 UTF1Q5T230 341 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 NDUFB8O95169 186 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 IGKV1-16P04430 117 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 VWC2Q2TAL6 325 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 C2orf66Q6UXQ4 117 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 SIGLEC8Q9NYZ4 499 aa12.09□□□□□ -0.47
SMARCA4-207ENST00000541122 MDC1Q14676 2089 aaKnown RBP12.08□□□□□ -0.47
SMARCA4-207ENST00000541122 A0A0U1RRA0 63 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 M0R1W7 72 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 CCL25O15444 150 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 THBDP07204 575 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 ZNF474Q6S9Z5 364 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 MYLKQ15746 1914 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 PMVKQ15126 192 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 C1orf122Q6ZSJ8 110 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 STHQ8IWL8 128 aa12.08□□□□□ -0.48
SMARCA4-207ENST00000541122 SLC25A16P16260 332 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 GAGE2AQ6NT46 116 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 NPC2P61916 151 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 LTBRP36941 435 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 FAM168AQ92567 244 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 RPL36AP83881 106 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 PRR20EP86478 221 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 PRR20CP86479 221 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 PRR20DP86480 221 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 PRR20BP86481 221 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 PRR20AP86496 221 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 RPL36ALQ969Q0 106 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 C7orf69Q9H7B7 122 aa12.07□□□□□ -0.48
SMARCA4-207ENST00000541122 ARHGEF17Q96PE2 2063 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 PAX4O43316 350 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 F8VRH5 84 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 K7EN84 100 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 C1QTNF4Q9BXJ3 329 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 PRO1854Q9UHT4 67 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 FAM223BA6NKX1 122 aa12.06□□□□□ -0.48
SMARCA4-207ENST00000541122 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms