RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 C20orf173Q96LM9 149 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 MRPL32Q9BYC8 188 aaKnown RBP12.39□□□□□ -0.43
UBC-208ENST00000540700 MAP6D1Q9H9H5 199 aa12.39□□□□□ -0.43
UBC-208ENST00000540700 OR4C46A6NHA9 309 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 DNASE2O00115 360 aaPredicted RBP12.38□□□□□ -0.43
UBC-208ENST00000540700 SLC17A3O00476 420 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 HMGB3O15347 200 aaKnown RBP12.38□□□□□ -0.43
UBC-208ENST00000540700 DEFB1P60022 68 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 TMEM41BQ5BJD5 291 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 DEFB125Q8N687 156 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 GPR82Q96P67 336 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 KRTAP17-1Q9BYP8 105 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 ZNF586Q9NXT0 402 aa12.38□□□□□ -0.43
UBC-208ENST00000540700 ZNF688P0C7X2 276 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 TPT1P13693 172 aaKnown RBP12.37□□□□□ -0.43
UBC-208ENST00000540700 HLA-DMBP28068 263 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 S100A7P31151 101 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 FHITP49789 147 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 RHOBP62745 196 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 BPIFA4PQ86YQ2 179 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 APRG1Q8IVJ8 170 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 FXYD5Q96DB9 178 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 TMEM14CQ9P0S9 112 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
UBC-208ENST00000540700 SORL1Q92673 2214 aa12.36□□□□□ -0.43
UBC-208ENST00000540700 SEC11BP0C7V7 166 aa12.36□□□□□ -0.43
UBC-208ENST00000540700 PRB4P10163 310 aaPredicted RBP12.36□□□□□ -0.43
UBC-208ENST00000540700 ATF4P18848 351 aaPredicted RBP12.36□□□□□ -0.43
UBC-208ENST00000540700 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
UBC-208ENST00000540700 DEFB131AP59861 70 aa12.36□□□□□ -0.43
UBC-208ENST00000540700 S100A7AQ86SG5 101 aa12.36□□□□□ -0.43
UBC-208ENST00000540700 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
UBC-208ENST00000540700 SLC51BQ86UW2 128 aa12.36□□□□□ -0.43
UBC-208ENST00000540700 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
UBC-208ENST00000540700 OR11H12B2RN74 326 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 NDUFB4O95168 129 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 MBP02144 154 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 OR10J4P0C629 311 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 SBSPONQ8IVN8 264 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 RNF182Q8N6D2 247 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 OR51M1Q9H341 326 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 HRH4Q9H3N8 390 aa12.35□□□□□ -0.43
UBC-208ENST00000540700 STAG3L2P0CL84 134 aa12.34□□□□□ -0.43
UBC-208ENST00000540700 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
UBC-208ENST00000540700 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
UBC-208ENST00000540700 PSMG4Q5JS54 123 aa12.34□□□□□ -0.43
UBC-208ENST00000540700 AKR1C8PQ5T2L2 129 aa12.34□□□□□ -0.43
UBC-208ENST00000540700 PAXXQ9BUH6 204 aa12.34□□□□□ -0.43
UBC-208ENST00000540700 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
UBC-208ENST00000540700 HYDINQ4G0P3 5121 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 TRBV19A0A075B6N1 114 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 A0A1W2PPV4 95 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 OR7C2O60412 319 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 HIST1H1EP10412 219 aaKnown RBP12.33□□□□□ -0.44
UBC-208ENST00000540700 EIF5AP63241 154 aaKnown RBP12.33□□□□□ -0.44
UBC-208ENST00000540700 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 C16orf92Q96LL3 132 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 FAM110AQ9BQ89 295 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 RNF24Q9Y225 148 aa12.33□□□□□ -0.44
UBC-208ENST00000540700 CSMD3Q7Z407 3707 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
UBC-208ENST00000540700 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
UBC-208ENST00000540700 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
UBC-208ENST00000540700 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 PSMB3P49720 205 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 KHDC3LQ587J8 217 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 FAM74A1Q5RGS3 127 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 GDF5OSQ5U4N7 250 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 BLNKQ8WV28 456 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 PHYHIPLQ96FC7 376 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 LINC00052Q96N35 136 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 ACTR3CQ9C0K3 210 aaPredicted RBP12.32□□□□□ -0.44
UBC-208ENST00000540700 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
UBC-208ENST00000540700 CTXND1A0A1B0GTU2 59 aa12.31□□□□□ -0.44
UBC-208ENST00000540700 F6UB75 175 aa12.31□□□□□ -0.44
UBC-208ENST00000540700 ISLRO14498 428 aa12.31□□□□□ -0.44
UBC-208ENST00000540700 MEOX2P50222 304 aa12.31□□□□□ -0.44
UBC-208ENST00000540700 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
UBC-208ENST00000540700 UBE2L3P68036 154 aaKnown RBP12.31□□□□□ -0.44
UBC-208ENST00000540700 LCN15Q6UWW0 184 aa12.31□□□□□ -0.44
UBC-208ENST00000540700 LINC00322Q6ZN03 302 aaPredicted RBP12.31□□□□□ -0.44
UBC-208ENST00000540700 A8MZ25 164 aa12.3□□□□□ -0.44
UBC-208ENST00000540700 NBEAP1P0C6P0 100 aa12.3□□□□□ -0.44
UBC-208ENST00000540700 TAS2R45P59539 299 aa12.3□□□□□ -0.44
UBC-208ENST00000540700 EXOC3-AS1Q8N2X6 119 aa12.3□□□□□ -0.44
UBC-208ENST00000540700 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
UBC-208ENST00000540700 SUN5Q8TC36 379 aa12.3□□□□□ -0.44
UBC-208ENST00000540700 TMPRSS5Q9H3S3 457 aa12.3□□□□□ -0.44
UBC-208ENST00000540700 ZNF705FA8MVS1 300 aaPredicted RBP12.29□□□□□ -0.44
UBC-208ENST00000540700 PRAC2D3DTV9 90 aa12.29□□□□□ -0.44
UBC-208ENST00000540700 ZNF253O75346 499 aa12.29□□□□□ -0.44
UBC-208ENST00000540700 FRMD6-AS1P0C7T7 363 aa12.29□□□□□ -0.44
UBC-208ENST00000540700 GCHFRP30047 84 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms