RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
INO80E-203ENST00000540562 J3KRW8 73 aa11.15□□□□□ -0.63
INO80E-203ENST00000540562 NCR2O95944 276 aa11.15□□□□□ -0.63
INO80E-203ENST00000540562 TOMM40O96008 361 aa11.15□□□□□ -0.63
INO80E-203ENST00000540562 LTAP01374 205 aa11.15□□□□□ -0.63
INO80E-203ENST00000540562 NDPQ00604 133 aa11.15□□□□□ -0.63
INO80E-203ENST00000540562 C3orf36Q3SXR2 165 aa11.15□□□□□ -0.63
INO80E-203ENST00000540562 FAM208BQ5VWN6 2430 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 I3L2K1 104 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 K7EIM0 57 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 LOXL1Q08397 574 aaPredicted RBP11.14□□□□□ -0.63
INO80E-203ENST00000540562 RBPMS2Q6ZRY4 209 aaKnown RBP11.14□□□□□ -0.63
INO80E-203ENST00000540562 STXBP6Q8NFX7 210 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 OR4F17Q8NGA8 305 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 RNF125Q96EQ8 232 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 MLST8Q9BVC4 326 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 LOC102724200A0A096LPH7 203 aaPredicted RBP11.14□□□□□ -0.63
INO80E-203ENST00000540562 CBY3A6NI87 242 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 HLA-DRB1P01911 266 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 CRYGCP07315 174 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 ECSCRQ19T08 205 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 LINC00311Q8N616 119 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
INO80E-203ENST00000540562 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
INO80E-203ENST00000540562 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
INO80E-203ENST00000540562 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
INO80E-203ENST00000540562 B9A039 149 aa11.13□□□□□ -0.63
INO80E-203ENST00000540562 LINC00614P0C842 121 aa11.13□□□□□ -0.63
INO80E-203ENST00000540562 TMEM30BQ3MIR4 351 aa11.13□□□□□ -0.63
INO80E-203ENST00000540562 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 ZNF785A8K8V0 405 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 NPIPB5A8MRT5 1133 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 IGLV2-11P01706 119 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 BPIFA4PQ86YQ2 179 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 NAA38Q9BRA0 125 aaKnown RBP11.12□□□□□ -0.63
INO80E-203ENST00000540562 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 TRAV9-2A0A087WT02 112 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.12□□□□□ -0.63
INO80E-203ENST00000540562 M0QZK8 103 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 SPRY2O43597 315 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 CRIP1P50238 77 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 AMN1Q8IY45 258 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 TLN2Q9Y4G6 2542 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 A0A087X0K7 114 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 ZNF491Q8N8L2 437 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 MYO18BQ8IUG5 2567 aa11.12□□□□□ -0.63
INO80E-203ENST00000540562 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 NBR2O15453 112 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 NUDT3O95989 172 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 CRYGBP07316 175 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 COX19Q49B96 90 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 FAM120AOSQ5T036 256 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 KLHDC1Q8N7A1 406 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 KAAG1Q9UBP8 84 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 RAXQ9Y2V3 346 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 FLNCQ14315 2725 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 IFI27P40305 119 aaPredicted RBP11.11□□□□□ -0.63
INO80E-203ENST00000540562 RBPJQ06330 500 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 C18orf15Q96N68 181 aa11.11□□□□□ -0.63
INO80E-203ENST00000540562 TRBV19A0A075B6N1 114 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 SYS1-DBNDD2H3BUS1 97 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 LIPFP07098 398 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 OTORQ9NRC9 128 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 MRPL27Q9P0M9 148 aaKnown RBP11.1□□□□□ -0.63
INO80E-203ENST00000540562 SETD2Q9BYW2 2564 aaPredicted RBP11.1□□□□□ -0.63
INO80E-203ENST00000540562 UQCRFS1P47985 274 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 JKAMPQ9P055 326 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 DPM3Q9P2X0 92 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 KLF12Q9Y4X4 402 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 ACACBO00763 2458 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 IGKV3-7A0A075B6H7 116 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 A0A1B0GUT8 65 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 D6R8Y8 96 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 ERCC8Q13216 396 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 LYZL1Q6UWQ5 148 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 CHRDL1Q9BU40 450 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
INO80E-203ENST00000540562 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
INO80E-203ENST00000540562 GPR183P32249 361 aa11.09□□□□□ -0.63
INO80E-203ENST00000540562 VAMP3Q15836 100 aa11.09□□□□□ -0.63
INO80E-203ENST00000540562 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
INO80E-203ENST00000540562 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
INO80E-203ENST00000540562 CCL25O15444 150 aa11.09□□□□□ -0.63
INO80E-203ENST00000540562 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
INO80E-203ENST00000540562 VGLL1Q99990 258 aa11.09□□□□□ -0.63
INO80E-203ENST00000540562 C20orf202A1L168 122 aa11.08□□□□□ -0.64
INO80E-203ENST00000540562 RNF151Q2KHN1 245 aa11.08□□□□□ -0.64
INO80E-203ENST00000540562 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
INO80E-203ENST00000540562 LOC105371242A0A075B767 164 aa11.08□□□□□ -0.64
INO80E-203ENST00000540562 RELQ04864 619 aaPredicted RBP11.08□□□□□ -0.64
INO80E-203ENST00000540562 FAM71F2Q6NXP2 309 aa11.08□□□□□ -0.64
INO80E-203ENST00000540562 FA2HQ7L5A8 372 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms