RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 ARPC1AQ92747 370 aa8.18□□□□□ -1.1
GPD2-213ENST00000540309 RAB37Q96AX2 223 aa8.18□□□□□ -1.1
GPD2-213ENST00000540309 TRAV8-1A0A0A6YYK1 113 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 H3BRN7 92 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 KLF17Q5JT82 389 aaPredicted RBP8.17□□□□□ -1.1
GPD2-213ENST00000540309 ZNF474Q6S9Z5 364 aaPredicted RBP8.17□□□□□ -1.1
GPD2-213ENST00000540309 C9orf106Q8NAJ2 232 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 CCL13Q99616 98 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 MAP1LC3AQ9H492 121 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 MED13Q9UHV7 2174 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 WDR87Q6ZQQ6 2873 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 TRBV25-1A0A075B6N4 114 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 NKX2-8O15522 239 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 SPRY3O43610 288 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 IGHV1-46P01743 117 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 IGKCP01834 107 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 FAM106CPP0CH98 169 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 WT1P19544 449 aaPredicted RBP8.17□□□□□ -1.1
GPD2-213ENST00000540309 FCGR2BP31994 310 aaPredicted RBP8.17□□□□□ -1.1
GPD2-213ENST00000540309 CKS2P33552 79 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 FXYD2P54710 66 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 LOXL1Q08397 574 aaPredicted RBP8.17□□□□□ -1.1
GPD2-213ENST00000540309 TWIST1Q15672 202 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 FAM106AQ4KMX7 169 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 MRAP2Q96G30 205 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 RASL11BQ9BPW5 248 aa8.17□□□□□ -1.1
GPD2-213ENST00000540309 IGLL5B9A064 214 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 MRPS12O15235 138 aaKnown RBP8.16□□□□□ -1.1
GPD2-213ENST00000540309 DPM2O94777 84 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 GCSHP23434 173 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 SCGB2A2Q13296 93 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 EXOC3-AS1Q8N2X6 119 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 FAM216BQ8N7L0 139 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 ZNF48Q96MX3 618 aaPredicted RBP8.16□□□□□ -1.1
GPD2-213ENST00000540309 AAMDCQ9H7C9 122 aa8.16□□□□□ -1.1
GPD2-213ENST00000540309 TSSC4Q9Y5U2 329 aaPredicted RBP8.16□□□□□ -1.1
GPD2-213ENST00000540309 MBD3L4A6NDZ8 208 aaPredicted RBP8.15□□□□□ -1.1
GPD2-213ENST00000540309 MBD3L3A6NE82 208 aaPredicted RBP8.15□□□□□ -1.1
GPD2-213ENST00000540309 MBD3L5A6NJ08 208 aaPredicted RBP8.15□□□□□ -1.1
GPD2-213ENST00000540309 I3L2K1 104 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 SLC25A17O43808 307 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 IGLC6P0CF74 106 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 SPRNQ5BIV9 151 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 IGFL2Q6UWQ7 119 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 TTC9CQ8N5M4 171 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 NUP37Q8NFH4 326 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 MBD3L2Q8NHZ7 208 aaPredicted RBP8.15□□□□□ -1.1
GPD2-213ENST00000540309 ZNF479Q96JC4 524 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
GPD2-213ENST00000540309 TIMM8BQ9Y5J9 83 aaPredicted RBP8.15□□□□□ -1.1
GPD2-213ENST00000540309 WDFY4Q6ZS81 3184 aa8.15□□□□□ -1.11
GPD2-213ENST00000540309 NAV3Q8IVL0 2385 aa8.15□□□□□ -1.11
GPD2-213ENST00000540309 LYZP61626 148 aa8.15□□□□□ -1.11
GPD2-213ENST00000540309 SMAGPQ0VAQ4 97 aa8.15□□□□□ -1.11
GPD2-213ENST00000540309 TMEM200BQ69YZ2 307 aa8.15□□□□□ -1.11
GPD2-213ENST00000540309 RAB1BQ9H0U4 201 aa8.15□□□□□ -1.11
GPD2-213ENST00000540309 DKK2Q9UBU2 259 aa8.15□□□□□ -1.11
GPD2-213ENST00000540309 LOC389332A0A1B0GUA5 103 aa8.14□□□□□ -1.11
GPD2-213ENST00000540309 KLK10O43240 276 aa8.14□□□□□ -1.11
GPD2-213ENST00000540309 CD40P25942 277 aa8.14□□□□□ -1.11
GPD2-213ENST00000540309 GAGE13Q4V321 117 aa8.14□□□□□ -1.11
GPD2-213ENST00000540309 DUX4L9Q6RFH8 374 aaPredicted RBP8.14□□□□□ -1.11
GPD2-213ENST00000540309 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
GPD2-213ENST00000540309 SH3BGRL2Q9UJC5 107 aa8.14□□□□□ -1.11
GPD2-213ENST00000540309 SIGLEC9Q9Y336 463 aa8.14□□□□□ -1.11
GPD2-213ENST00000540309 TRIOO75962 3097 aa8.14□□□□□ -1.11
GPD2-213ENST00000540309 KNTC1P50748 2209 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 NPIPB5A8MRT5 1133 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 PATE3B3GLJ2 98 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 TNFRSF13BO14836 293 aaPredicted RBP8.13□□□□□ -1.11
GPD2-213ENST00000540309 NPYP01303 97 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 IGKV1-17P01599 117 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 FAM201AQ5SY85 155 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 HCP5Q6MZN7 132 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 CCDC144NLQ6NUI1 221 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 TMEM105Q8N8V8 129 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
GPD2-213ENST00000540309 KAAG1Q9UBP8 84 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 TEX22C9J3V5 150 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 SH2D1AO60880 128 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 IGHV3-48P01763 117 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 PLNP26678 52 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 DLX6P56179 175 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 CKS1BP61024 79 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 RRN3P1Q2M238 152 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 C12orf74Q32Q52 190 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 PPP1R27Q86WC6 154 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 TDHQ8IZJ6 230 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 Q8N8P6 123 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 NAA38Q9BRA0 125 aaKnown RBP8.13□□□□□ -1.11
GPD2-213ENST00000540309 TMEM133Q9H2Q1 129 aa8.13□□□□□ -1.11
GPD2-213ENST00000540309 NHP2Q9NX24 153 aaKnown RBP8.13□□□□□ -1.11
GPD2-213ENST00000540309 TRAV12-1A0A0B4J245 112 aa8.12□□□□□ -1.11
GPD2-213ENST00000540309 TRAV17A0A0B4J275 112 aa8.12□□□□□ -1.11
GPD2-213ENST00000540309 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
GPD2-213ENST00000540309 H3BMG7 143 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms