RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 PPP1R14DQ9NXH3 145 aa9.9□□□□□ -0.82
SEMA4D-222ENST00000540183 A0A087X0K7 114 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 A0A0J9YY99 117 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 TMBIM6P55061 237 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 PLP1P60201 277 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 RAP2BP61225 183 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 CLINT1Q14677 625 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 TMEM256Q8N2U0 113 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 RNASE8Q8TDE3 154 aaKnown RBP9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 RPUSD4Q96CM3 377 aaKnown RBP9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 Q9H8V8 135 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 PSENENQ9NZ42 101 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 TIMM8BQ9Y5J9 83 aaPredicted RBP9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 V9GYH0 126 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 HERC1Q15751 4861 aa9.89□□□□□ -0.83
SEMA4D-222ENST00000540183 TRAV26-1A0A087WT03 109 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 H3BTX0 84 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 SSSCA1O60232 199 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 HOXA5P20719 270 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 ID3Q02535 119 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 SLC38A11Q08AI6 406 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 OR5I1Q13606 314 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 LRRC20Q8TCA0 184 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 ARL6Q9H0F7 186 aa9.88□□□□□ -0.83
SEMA4D-222ENST00000540183 PIGBOS1A0A0B4J2F0 54 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 METTL15P1P0C7V9 234 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 S100A7P31151 101 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 CDKN1BP46527 198 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 DLK1P80370 383 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 Q8N1X5 172 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 SCRT2Q9NQ03 307 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 FAT1Q14517 4588 aa9.87□□□□□ -0.83
SEMA4D-222ENST00000540183 C9orf170A2RU37 121 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 J3KRW8 73 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 SLC17A3O00476 420 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 AP3S2P59780 193 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 ESRGQ1W209 222 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 GFI1BQ5VTD9 330 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 MORN5Q5VZ52 161 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 TMEM263Q8WUH6 116 aaKnown RBP9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 GNPNAT1Q96EK6 184 aaPredicted RBP9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 BCL7BQ9BQE9 202 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 ARV1Q9H2C2 271 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 FLVCR2Q9UPI3 526 aa9.86□□□□□ -0.83
SEMA4D-222ENST00000540183 GAGE12BA1L429 117 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 ZNF701M0R085 212 aaPredicted RBP9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 GAGE7O76087 117 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 GAGE12FP0CL80 117 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 GAGE12GP0CL81 117 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 GAGE12IP0CL82 117 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 ANXA7P20073 488 aaKnown RBP9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 ARL16Q0P5N6 197 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 TMEM14EPQ6UXP3 125 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 ZBTB8BQ8NAP8 495 aaPredicted RBP9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 RXFP4Q8TDU9 374 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 SMIM8Q96KF7 97 aa9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 ZNF331Q9NQX6 463 aaPredicted RBP9.85□□□□□ -0.83
SEMA4D-222ENST00000540183 LINC00854A0A1B0GVQ3 168 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 H7BYZ3 331 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 SCGB1D2O95969 90 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 FUSP35637 526 aaKnown RBP eCLIP9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 SELENOTP62341 195 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 ZNF493Q6ZR52 646 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 LINC00305Q7Z4B0 112 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 CCDC190Q86UF4 302 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 Q9H3A6 140 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 ZNF586Q9NXT0 402 aa9.84□□□□□ -0.83
SEMA4D-222ENST00000540183 NOL3O60936 208 aaKnown RBP9.83□□□□□ -0.84
SEMA4D-222ENST00000540183 M6PRP20645 277 aa9.83□□□□□ -0.84
SEMA4D-222ENST00000540183 OR10J6PQ8NGY7 276 aa9.83□□□□□ -0.84
SEMA4D-222ENST00000540183 TMPRSS5Q9H3S3 457 aa9.83□□□□□ -0.84
SEMA4D-222ENST00000540183 NPVFQ9HCQ7 196 aa9.83□□□□□ -0.84
SEMA4D-222ENST00000540183 TRAV12-3A0A0B4J271 114 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 K7EPK0 472 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 AGPAT2O15120 278 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 CT45A10P0DMU9 189 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 UBE2MP61081 183 aaKnown RBP9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 OPCMLQ14982 345 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 TEPPQ6URK8 271 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 LCN15Q6UWW0 184 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 Q6ZTI0 123 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 TMEM37Q8WXS4 190 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 SLC50A1Q9BRV3 221 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 MGAT4CQ9UBM8 478 aa9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 RCL1Q9Y2P8 373 aaKnown RBP9.82□□□□□ -0.84
SEMA4D-222ENST00000540183 TRAV5A0A0B4J249 113 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 H3BQ15 152 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 GOSR2O14653 212 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 RLN2P04090 185 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 CXCL2P19875 107 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 TTC32Q5I0X7 151 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 CCDC28AQ8IWP9 274 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 OR10P1Q8NGE3 313 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 MGST2Q99735 147 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 UPK3BQ9BT76 320 aa9.81□□□□□ -0.84
SEMA4D-222ENST00000540183 MRPS16Q9Y3D3 137 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms