RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 MUC4Q99102 2169 aa10.56□□□□□ -0.72
CACNB4-210ENST00000539935 SPSB3Q6PJ21 355 aa10.56□□□□□ -0.72
CACNB4-210ENST00000539935 RPRMLQ8N4K4 120 aa10.56□□□□□ -0.72
CACNB4-210ENST00000539935 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
CACNB4-210ENST00000539935 A0A1W2PR77 199 aa10.56□□□□□ -0.72
CACNB4-210ENST00000539935 GREM1O60565 184 aa10.56□□□□□ -0.72
CACNB4-210ENST00000539935 LINC00114Q6XXX2 140 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 ZNF138P52744 262 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
CACNB4-210ENST00000539935 EXOC3-AS1Q8N2X6 119 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 FBLN5Q9UBX5 448 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 WDR81Q562E7 1941 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 TRBV24-1A0A075B6N3 115 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 ID3Q02535 119 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 C1QTNF4Q9BXJ3 329 aa10.55□□□□□ -0.72
CACNB4-210ENST00000539935 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 TCF20Q9UGU0 1960 aaKnown RBP10.54□□□□□ -0.72
CACNB4-210ENST00000539935 TRAV12-2A0A075B6T6 113 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 FOXG1P55316 489 aaPredicted RBP10.54□□□□□ -0.72
CACNB4-210ENST00000539935 LY6G5BQ8NDX9 201 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 SPTSSBQ8NFR3 76 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 DLEU1O43261 78 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 UBE2BP63146 152 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 PLXNB1O43157 2135 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 IL18BPO95998 194 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 DSCR9P59020 149 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 HIST3H2BBQ8N257 126 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
CACNB4-210ENST00000539935 K7ERS5 55 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 RS1O15537 224 aa10.54□□□□□ -0.72
CACNB4-210ENST00000539935 RPUSD1Q9UJJ7 312 aaKnown RBP10.54□□□□□ -0.72
CACNB4-210ENST00000539935 TRGV9Q99603 122 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 WDR83OSQ9Y284 106 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 A0A0A6YYD4 124 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 ZNF319Q9P2F9 582 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 DEFB130BP0DP73 79 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 DEFB130AP0DP74 79 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 TSC2P49815 1807 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 IGHV2-26A0A0B4J1V2 119 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 AMBPP02760 352 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 CRYBA4P53673 196 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 MP68P56378 58 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 NEGR1Q7Z3B1 354 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 BOD1L2Q8IYS8 172 aa10.53□□□□□ -0.72
CACNB4-210ENST00000539935 MPV17L2Q567V2 206 aa10.52□□□□□ -0.72
CACNB4-210ENST00000539935 LY6G6FQ5SQ64 297 aa10.52□□□□□ -0.72
CACNB4-210ENST00000539935 LYZL1Q6UWQ5 148 aa10.52□□□□□ -0.72
CACNB4-210ENST00000539935 SHISA9B4DS77 424 aa10.52□□□□□ -0.72
CACNB4-210ENST00000539935 MPZP25189 248 aa10.52□□□□□ -0.72
CACNB4-210ENST00000539935 TNRC6AQ8NDV7 1962 aaKnown RBP10.52□□□□□ -0.73
CACNB4-210ENST00000539935 TRAV1-1A0A0B4J248 108 aa10.52□□□□□ -0.73
CACNB4-210ENST00000539935 ZNF362Q5T0B9 420 aaPredicted RBP10.52□□□□□ -0.73
CACNB4-210ENST00000539935 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
CACNB4-210ENST00000539935 SYNJ2BPP57105 145 aa10.52□□□□□ -0.73
CACNB4-210ENST00000539935 BRK1Q8WUW1 75 aa10.52□□□□□ -0.73
CACNB4-210ENST00000539935 GAGE12HA6NDE8 117 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 ZCCHC24Q8N2G6 241 aaKnown RBP10.51□□□□□ -0.73
CACNB4-210ENST00000539935 BTCP35070 178 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 C1orf194Q5T5A4 169 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 MINOS1Q5TGZ0 78 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 AGMATQ9BSE5 352 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 MINOS1-NBL1R4GNA1 71 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 FGF16O43320 207 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 C9orf139Q6ZV77 190 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 NUP35Q8NFH5 326 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 ATP6V0BQ99437 205 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 ARHGAP21Q5T5U3 1957 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 A0A1B0GWJ7 208 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 A8MWP6 167 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 PPDPFLQ8WWR9 84 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 LYZL4Q96KX0 146 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 IGHV1-18A0A0C4DH31 117 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 E9PLN8 166 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 IGKV1-9A0A0C4DH69 117 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 VMO1Q7Z5L0 202 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 VSIRQ9H7M9 311 aa10.51□□□□□ -0.73
CACNB4-210ENST00000539935 F5H768 121 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 USMG5Q96IX5 58 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 SS18L2Q9UHA2 77 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 TSSC4Q9Y5U2 329 aaPredicted RBP10.5□□□□□ -0.73
CACNB4-210ENST00000539935 EPOPA6NHQ4 379 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 TMEM243Q9BU79 118 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 WFDC1Q9HC57 220 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 A0A1B0GW64 132 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 LYNX1G3V0Z9 82 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 CXCL1P09341 107 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 LYNX1P0DP58 116 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 SYS1-DBNDD2H3BUS1 97 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 NDUFB1O75438 58 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
CACNB4-210ENST00000539935 LTBP1Q14766 1721 aa10.49□□□□□ -0.73
CACNB4-210ENST00000539935 H0YIZ8 118 aa10.49□□□□□ -0.73
CACNB4-210ENST00000539935 LCN12Q6JVE5 192 aa10.49□□□□□ -0.73
CACNB4-210ENST00000539935 IGHV1-46P01743 117 aa10.49□□□□□ -0.73
CACNB4-210ENST00000539935 FAM104BQ5XKR9 115 aa10.49□□□□□ -0.73
CACNB4-210ENST00000539935 LYPD1Q8N2G4 141 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms