RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ANKRD39Q53RE8 183 aa10.44□□□□□ -0.74
UBE3B-209ENST00000539584 COL25A1Q9BXS0 654 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-209ENST00000539584 ICE1Q9Y2F5 2266 aa10.44□□□□□ -0.74
UBE3B-209ENST00000539584 MUC3AQ02505 3323 aa10.44□□□□□ -0.74
UBE3B-209ENST00000539584 SVILO95425 2214 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 GNG7O60262 68 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 HBDP02042 147 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 CD3EP07766 207 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 RPL7P18124 248 aaKnown RBP10.43□□□□□ -0.74
UBE3B-209ENST00000539584 TMEM97Q5BJF2 176 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 GFRALQ6UXV0 394 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 C2orf91Q6ZV80 131 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 LY6G5BQ8NDX9 201 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 OR11H6Q8NGC7 330 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 C17orf77Q96MU5 243 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 PRELID3AQ96N28 172 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 THYN1Q9P016 225 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 DPM3Q9P2X0 92 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 A6NDN8 102 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
UBE3B-209ENST00000539584 PIFOQ8TCI5 191 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
UBE3B-209ENST00000539584 A0A087X0K7 114 aa10.42□□□□□ -0.74
UBE3B-209ENST00000539584 OR2T8A6NH00 312 aa10.42□□□□□ -0.74
UBE3B-209ENST00000539584 D6R8Y8 96 aa10.42□□□□□ -0.74
UBE3B-209ENST00000539584 H0Y8G0 127 aa10.42□□□□□ -0.74
UBE3B-209ENST00000539584 LYZL1Q6UWQ5 148 aa10.42□□□□□ -0.74
UBE3B-209ENST00000539584 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
UBE3B-209ENST00000539584 H3BRM9 83 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 TIMM23O14925 209 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 KLK10O43240 276 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 COX7A1P24310 79 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 PRR31Q5SQ13 230 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 GTF2H5Q6ZYL4 71 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 WDFY4Q6ZS81 3184 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 IGLV11-55A0A075B6I3 123 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 A0A096LNJ9 63 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 C7orf71A4D174 169 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 K7ERU9 68 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 SH2D1AO60880 128 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 FGF6P10767 208 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 NHLH1Q02575 133 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 OCIAD2Q56VL3 154 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 ZNF562Q6V9R5 426 aa10.41□□□□□ -0.74
UBE3B-209ENST00000539584 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 M0R1W7 72 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 PAX8Q06710 450 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 HSD52Q0P140 79 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 COTL1Q14019 142 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 TTC9CQ8N5M4 171 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 CFHR4Q92496 578 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 PRR25Q96S07 402 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 CNFNQ9BYD5 112 aa10.4□□□□□ -0.74
UBE3B-209ENST00000539584 COL6A3P12111 3177 aa10.4□□□□□ -0.75
UBE3B-209ENST00000539584 NBEAQ8NFP9 2946 aa10.4□□□□□ -0.75
UBE3B-209ENST00000539584 M0R3E3 92 aa10.4□□□□□ -0.75
UBE3B-209ENST00000539584 RAB9AP51151 201 aa10.4□□□□□ -0.75
UBE3B-209ENST00000539584 C5orf64Q2M2E5 130 aa10.4□□□□□ -0.75
UBE3B-209ENST00000539584 AP1S3Q96PC3 154 aa10.4□□□□□ -0.75
UBE3B-209ENST00000539584 GAGE12BA1L429 117 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 CBY3A6NI87 242 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 OOSP1A8MZH6 123 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 CKS2P33552 79 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 MRPL51Q4U2R6 128 aaKnown RBP10.39□□□□□ -0.75
UBE3B-209ENST00000539584 CCDC144NLQ6NUI1 221 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 AMN1Q8IY45 258 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 OR8A1Q8NGG7 326 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 C8orf49Q96NF6 230 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 FANCD2OSQ96PS1 177 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 C21orf62Q9NYP8 219 aa10.39□□□□□ -0.75
UBE3B-209ENST00000539584 A1L4Q6 167 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 SMAD7O15105 426 aaKnown RBP10.38□□□□□ -0.75
UBE3B-209ENST00000539584 NCR2O95944 276 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 VKORC1Q9BQB6 163 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 MCRIP2Q9BUT9 160 aaKnown RBP10.38□□□□□ -0.75
UBE3B-209ENST00000539584 ONECUT1Q9UBC0 465 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 RABAC1Q9UI14 185 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 TIMM8BQ9Y5J9 83 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-209ENST00000539584 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-209ENST00000539584 GAGE10A6NGK3 116 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 LDLRAD2Q5SZI1 272 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 MALRD1Q5VYJ5 2156 aa10.38□□□□□ -0.75
UBE3B-209ENST00000539584 PLXNB1O43157 2135 aa10.37□□□□□ -0.75
UBE3B-209ENST00000539584 PRRC2CQ9Y520 2896 aaKnown RBP10.37□□□□□ -0.75
UBE3B-209ENST00000539584 ARFGEF3Q5TH69 2177 aa10.37□□□□□ -0.75
UBE3B-209ENST00000539584 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
UBE3B-209ENST00000539584 C21orf62-AS1Q17RA5 79 aa10.37□□□□□ -0.75
UBE3B-209ENST00000539584 Q71RC1 249 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-209ENST00000539584 Q8NA96 180 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms