RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 C16orf54Q6UWD8 224 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 FAM167A-AS1Q96KT0 104 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 SHANK2-AS3Q9BTD1 123 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 SLC25A39Q9BZJ4 359 aaPredicted RBP9.73□□□□□ -0.85
CCDC42-202ENST00000539522 OR51M1Q9H341 326 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 TMPRSS5Q9H3S3 457 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 TREM1Q9NP99 234 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 MANBALQ9NQG1 85 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 C19orf73Q9NVV2 129 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 VAX2Q9UIW0 290 aa9.73□□□□□ -0.85
CCDC42-202ENST00000539522 NDUFS6O75380 124 aaKnown RBP9.72□□□□□ -0.85
CCDC42-202ENST00000539522 GP9P14770 177 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 BMI1P35226 326 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 HAGHQ16775 308 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 IQCF2Q8IXL9 164 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 SUN5Q8TC36 379 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 NARS2Q96I59 477 aaKnown RBP9.72□□□□□ -0.85
CCDC42-202ENST00000539522 UHRF2Q96PU4 802 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 RARRES2Q99969 163 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 SLC25A2Q9BXI2 301 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 SMAD5-AS1Q9Y6J3 95 aa9.72□□□□□ -0.85
CCDC42-202ENST00000539522 SORL1Q92673 2214 aa9.71□□□□□ -0.85
CCDC42-202ENST00000539522 LOC102723971A0A1B0GUV8 181 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 A0A1W2PS18 150 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 ZNF98A6NK75 572 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 H3BRN7 92 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 MRPS12O15235 138 aaKnown RBP9.71□□□□□ -0.86
CCDC42-202ENST00000539522 OR7C2O60412 319 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 BCL2P10415 239 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 SRSF3P84103 164 aaKnown RBP9.71□□□□□ -0.86
CCDC42-202ENST00000539522 TOR2AQ5JU69 321 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 LEMD1Q68G75 181 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 FAM24BQ8N5W8 94 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 OR2K2Q8NGT1 345 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 DYNLRB2Q8TF09 96 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 GPR61Q9BZJ8 451 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 TMEM231Q9H6L2 316 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 TMEM14CQ9P0S9 112 aa9.71□□□□□ -0.86
CCDC42-202ENST00000539522 HUWE1Q7Z6Z7 4374 aaKnown RBP9.71□□□□□ -0.86
CCDC42-202ENST00000539522 TMEM218A2RU14 115 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 KRBOX1C9JBD0 128 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 TSPAN4O14817 238 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 PAGE4O60829 102 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 CD7P09564 240 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 DEFA6Q01524 100 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 ICAM4Q14773 271 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 TCF24Q7RTU0 167 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 BPIFA4PQ86YQ2 179 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 ZNF503Q96F45 646 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 ARL2-SNX15V9GYD0 113 aa9.7□□□□□ -0.86
CCDC42-202ENST00000539522 COL7A1Q02388 2944 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 HIST1H1EP10412 219 aaKnown RBP9.69□□□□□ -0.86
CCDC42-202ENST00000539522 C1orf194Q5T5A4 169 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 LCN12Q6JVE5 192 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 RXFP4Q8TDU9 374 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 GRAMD2BQ96HH9 432 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 NKX6-2Q9C056 277 aaPredicted RBP9.69□□□□□ -0.86
CCDC42-202ENST00000539522 SLC35B3Q9H1N7 401 aa9.69□□□□□ -0.86
CCDC42-202ENST00000539522 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 C9JQL5 133 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 SOCS3O14543 225 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 NBEAP1P0C6P0 100 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
CCDC42-202ENST00000539522 ODF3L2Q3SX64 289 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 CST9LP1Q5W188 147 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 FXYD5Q96DB9 178 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 GPR82Q96P67 336 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 MS4A6AQ9H2W1 248 aa9.68□□□□□ -0.86
CCDC42-202ENST00000539522 FAM74A7A6NL05 159 aa9.67□□□□□ -0.86
CCDC42-202ENST00000539522 K7EQG2 157 aa9.67□□□□□ -0.86
CCDC42-202ENST00000539522 SRP19P09132 144 aaKnown RBP9.67□□□□□ -0.86
CCDC42-202ENST00000539522 OR10J4P0C629 311 aa9.67□□□□□ -0.86
CCDC42-202ENST00000539522 PYYP10082 97 aa9.67□□□□□ -0.86
CCDC42-202ENST00000539522 RPL7P18124 248 aaKnown RBP9.67□□□□□ -0.86
CCDC42-202ENST00000539522 UBE2G2P60604 165 aa9.67□□□□□ -0.86
CCDC42-202ENST00000539522 UBE2L3P68036 154 aaKnown RBP9.67□□□□□ -0.86
CCDC42-202ENST00000539522 ZNF124Q15973 351 aa9.67□□□□□ -0.86
CCDC42-202ENST00000539522 OR8I2Q8N0Y5 310 aa9.67□□□□□ -0.86
CCDC42-202ENST00000539522 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
CCDC42-202ENST00000539522 HELTA6NFD8 242 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 C11orf94C9JXX5 98 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 F6UZH7 168 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 PDE6DO43924 150 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 SFTA3P0C7M3 94 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 TFPI2P48307 235 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 CD81P60033 236 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 GUCA2BQ16661 112 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 SIGLEC15Q6ZMC9 328 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
CCDC42-202ENST00000539522 YTHDF2Q9Y5A9 579 aaKnown RBP9.66□□□□□ -0.86
CCDC42-202ENST00000539522 F8W036 122 aa9.65□□□□□ -0.86
CCDC42-202ENST00000539522 TMEM250H0YL14 139 aa9.65□□□□□ -0.86
CCDC42-202ENST00000539522 SOHLH1Q5JUK2 328 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms