RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 MFAP2P55001 183 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 HSPE1P61604 102 aaKnown RBP4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 HBBP68871 147 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 TCF15Q12870 199 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 PMVKQ15126 192 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 PIGYQ3MUY2 71 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 KLF17Q5JT82 389 aaPredicted RBP4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 POM121L12Q8N7R1 296 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 RFESDQ8TAC1 157 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 CACNG5Q9UF02 275 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 MYO7BQ6PIF6 2116 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 TRBV7-3A0A075B6L6 115 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 SPINK4O60575 86 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 IAPPP10997 89 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 EMP1P54849 157 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 PAX8Q06710 450 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 LYRM7Q5U5X0 104 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 IGFL2Q6UWQ7 119 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 CIARTQ8N365 385 aaPredicted RBP4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 GFRA4Q9GZZ7 299 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 DKK4Q9UBT3 224 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 DNAJC13O75165 2243 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 PTPRBP23467 1997 aa4.6□□□□□ -1.67
RAB3GAP1-207ENST00000539493 TRBV25-1A0A075B6N4 114 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 A0A096LNJ9 63 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM240AA0A1B0GVK7 77 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 TINCRA0A1B0GVN0 87 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A10PA6NDY2 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A20PA6NIJ5 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A7PA6NKC0 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A22PA8MWA6 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A12PA8MX19 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A23PA8MXZ1 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 NGFP01138 241 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A13PP0C7W8 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FAM90A24PP0C7X0 464 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 HLA-DMBP28068 263 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 LINC01559Q495D7 138 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 ZNF672Q499Z4 452 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 SPANXN5Q5MJ07 72 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 TRPT1Q86TN4 253 aaKnown RBP4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 SLC25A2Q9BXI2 301 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 PRORYQ9H606 182 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 PRNDQ9UKY0 176 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 NPIPB11E5RHQ5 1161 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 MALLQ13021 153 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 DAZAP2Q15038 168 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 SIGLEC15Q6ZMC9 328 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 OR4C13Q8NGP0 309 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 TMUB1Q9BVT8 246 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FGF23Q9GZV9 251 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FZR1Q9UM11 496 aa4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 FOXA2Q9Y261 457 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-207ENST00000539493 IGKV1D-13A0A0B4J2D9 117 aa4.59□□□□□ -1.68
RAB3GAP1-207ENST00000539493 A8MWV9 139 aa4.59□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGKV1-13P0DP09 117 aa4.59□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FXYD3Q14802 87 aa4.59□□□□□ -1.68
RAB3GAP1-207ENST00000539493 Q6ZQT7 251 aa4.59□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRSS33Q8NF86 280 aa4.59□□□□□ -1.68
RAB3GAP1-207ENST00000539493 BSNQ9UPA5 3926 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TRBV6-6A0A0A6YYG2 114 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LINC01546A6NGU7 62 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 NXPH3O95157 252 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 RBM11P57052 281 aaKnown RBP4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGFBPL1Q8WX77 278 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TMEM190Q8WZ59 177 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FAM168AQ92567 244 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HHLA3Q9XRX5 114 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DCHS1Q96JQ0 3298 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FAM214BQ7L5A3 538 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DTX2Q86UW9 622 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 MDP1Q86V88 176 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 ANKRD29Q8N6D5 301 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 EDA2RQ9HAV5 297 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 CCL28Q9NRJ3 127 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TMEM167BQ9NRX6 74 aa4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DSPP15924 2871 aaKnown RBP4.58□□□□□ -1.68
RAB3GAP1-207ENST00000539493 FAM186AA6NE01 2351 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TRAV17A0A0B4J275 112 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 EPM2AB3EWF7 344 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 OVOL3O00110 214 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HCFC1P51610 2035 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TMEM258P61165 79 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DEFB109BQ30KR1 87 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 C9orf153Q5TBE3 101 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 TMEM86BQ8N661 226 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DPH3Q96FX2 82 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HS3ST6Q96QI5 342 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRSS22Q9GZN4 317 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 AKAP13Q12802 2813 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 MYMXA0A1B0GTQ4 84 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 PRSS46E5RG02 174 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 HAX1O00165 279 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 LTAP01374 205 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 APOHP02749 345 aaPredicted RBP4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 IGHV1-2P23083 117 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 UBE2D1P51668 147 aa4.57□□□□□ -1.68
RAB3GAP1-207ENST00000539493 DEFB121Q5J5C9 76 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms