RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PEF1Q9UBV8 284 aaKnown RBP6.98□□□□□ -1.29
GGA3-202ENST00000538886 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 A0A1B0GW64 132 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 A0A1W2PPI3 338 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 SRRM4A7MD48 611 aaKnown RBP6.98□□□□□ -1.29
GGA3-202ENST00000538886 DLX6P56179 175 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 TCTAP57738 103 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 RPEL1Q2QD12 228 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 C10orf99Q6UWK7 81 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 CLEC19AQ6UXS0 136 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 CYP2G1PQ6ZSU1 146 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 PSENENQ9NZ42 101 aa6.98□□□□□ -1.29
GGA3-202ENST00000538886 A0A1B0GW15 77 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 HILS1P60008 231 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.97□□□□□ -1.29
GGA3-202ENST00000538886 GPR146Q96CH1 333 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 WDR61Q9GZS3 305 aaKnown RBP6.97□□□□□ -1.29
GGA3-202ENST00000538886 TMEM222Q9H0R3 208 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 ESM1Q9NQ30 184 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 TRBV6-6A0A0A6YYG2 114 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 GPR183P32249 361 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 RHOGP84095 191 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 IGHV3-66A0A0C4DH42 116 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 PGPEP1LA6NFU8 196 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 PAGE4O60829 102 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 TCL1AP56279 114 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 DEFB121Q5J5C9 76 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 C5orf17Q8NAS9 161 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 DYNLRB2Q8TF09 96 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 OR4C12Q96R67 309 aa6.97□□□□□ -1.29
GGA3-202ENST00000538886 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.96□□□□□ -1.29
GGA3-202ENST00000538886 PIGBOS1A0A0B4J2F0 54 aa6.96□□□□□ -1.29
GGA3-202ENST00000538886 F2Z2F3 143 aa6.96□□□□□ -1.29
GGA3-202ENST00000538886 H0Y980 276 aa6.96□□□□□ -1.29
GGA3-202ENST00000538886 AREGP15514 252 aa6.96□□□□□ -1.29
GGA3-202ENST00000538886 ATP5G2Q06055 141 aa6.96□□□□□ -1.29
GGA3-202ENST00000538886 PDLIM3Q53GG5 364 aaPredicted RBP6.96□□□□□ -1.29
GGA3-202ENST00000538886 RNASEKQ6P5S7 137 aaKnown RBP6.96□□□□□ -1.29
GGA3-202ENST00000538886 STPG3Q8N7X2 389 aa6.96□□□□□ -1.29
GGA3-202ENST00000538886 H3BUT2 72 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 ISLRO14498 428 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 PITX3O75364 302 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 OR9G9P0C7N8 305 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 CGB3P0DN86 165 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 CGB7P0DN87 165 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 Q6ZSV7 163 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 UHRF2Q96PU4 802 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 GEMIN7Q9H840 131 aaKnown RBP6.96□□□□□ -1.3
GGA3-202ENST00000538886 TP73-AS1Q9UF72 201 aa6.96□□□□□ -1.3
GGA3-202ENST00000538886 A0A096LNT2 108 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 UBE2L5PA0A1B0GUS4 154 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 FOXI3A8MTJ6 420 aaPredicted RBP6.95□□□□□ -1.3
GGA3-202ENST00000538886 M0R2Z0 102 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 HSPE1P61604 102 aaKnown RBP6.95□□□□□ -1.3
GGA3-202ENST00000538886 ZNF833PQ6ZTB9 187 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 VSIRQ9H7M9 311 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 C7orf71A4D174 169 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 CRYM-AS1A6NIL9 109 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 BMPR1BO00238 502 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 FSTL3O95633 263 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 C3orf79P0CE67 100 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 ORM2P19652 201 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 C8orf86Q6ZUL3 223 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 OR5AN1Q8NGI8 311 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 CITED2Q99967 270 aaPredicted RBP6.95□□□□□ -1.3
GGA3-202ENST00000538886 TECRQ9NZ01 308 aaKnown RBP6.95□□□□□ -1.3
GGA3-202ENST00000538886 CLPSL1A2RUU4 121 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 SYNGR2O43760 224 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 NPY1RP25929 384 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 C15orf32Q32M92 178 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 LINC00311Q8N616 119 aa6.95□□□□□ -1.3
GGA3-202ENST00000538886 MRPS16Q9Y3D3 137 aaKnown RBP6.95□□□□□ -1.3
GGA3-202ENST00000538886 PROP1O75360 226 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 MRPL54Q6P161 138 aaKnown RBP6.94□□□□□ -1.3
GGA3-202ENST00000538886 SLC25A34Q6PIV7 304 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 SRSF8Q9BRL6 282 aaKnown RBP6.94□□□□□ -1.3
GGA3-202ENST00000538886 RABAC1Q9UI14 185 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 FOXA2Q9Y261 457 aaPredicted RBP6.94□□□□□ -1.3
GGA3-202ENST00000538886 A6NJY4 79 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 C11orf94C9JXX5 98 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 BOD1L2Q8IYS8 172 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 OR10G8Q8NGN5 311 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 OR5B3Q8NH48 314 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 LINC01006Q8NI28 216 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 LSM10Q969L4 123 aaKnown RBP6.94□□□□□ -1.3
GGA3-202ENST00000538886 ODF3BA8MYP8 253 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 UPK2O00526 184 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 NDUFB4O95168 129 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 SRIP30626 198 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 LYZP61626 148 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 IL15RAQ13261 267 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 GATAD1Q8WUU5 269 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 KLK15Q9H2R5 256 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 PXMP4Q9Y6I8 212 aa6.94□□□□□ -1.3
GGA3-202ENST00000538886 MXRA5Q9NR99 2828 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 TRAV8-6A0A0B4J262 113 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 SLC17A3O00476 420 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms