RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 HIST1H1EP10412 219 aaKnown RBP17.61■□□□□ 0.41
TMEM260-202ENST00000538838 GCHFRP30047 84 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 IFITM2Q01629 132 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 SAMD5Q5TGI4 173 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 BLNKQ8WV28 456 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 MBD3L1Q8WWY6 194 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 UBQLN2Q9UHD9 624 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 SLC17A3O00476 420 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 PAFAH1B2P68402 229 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 TMPRSS5Q9H3S3 457 aa17.61■□□□□ 0.41
TMEM260-202ENST00000538838 K7EQG2 157 aa17.6■□□□□ 0.41
TMEM260-202ENST00000538838 SOCS3O14543 225 aa17.6■□□□□ 0.41
TMEM260-202ENST00000538838 FAM24BQ8N5W8 94 aa17.6■□□□□ 0.41
TMEM260-202ENST00000538838 ZNF256Q9Y2P7 627 aaPredicted RBP17.6■□□□□ 0.41
TMEM260-202ENST00000538838 MGAM2Q2M2H8 2515 aa17.6■□□□□ 0.41
TMEM260-202ENST00000538838 TRBV19A0A075B6N1 114 aa17.59■□□□□ 0.41
TMEM260-202ENST00000538838 NBEAP1P0C6P0 100 aa17.59■□□□□ 0.41
TMEM260-202ENST00000538838 MEOX2P50222 304 aa17.59■□□□□ 0.41
TMEM260-202ENST00000538838 OR4C46A6NHA9 309 aa17.58■□□□□ 0.41
TMEM260-202ENST00000538838 PCNPQ8WW12 178 aaKnown RBP17.58■□□□□ 0.41
TMEM260-202ENST00000538838 TRAV2A0A0B4J234 112 aa17.58■□□□□ 0.4
TMEM260-202ENST00000538838 GUK1Q16774 197 aa17.58■□□□□ 0.4
TMEM260-202ENST00000538838 IGFL4Q6B9Z1 124 aa17.58■□□□□ 0.4
TMEM260-202ENST00000538838 SAT2Q96F10 170 aaPredicted RBP17.58■□□□□ 0.4
TMEM260-202ENST00000538838 SORL1Q92673 2214 aa17.58■□□□□ 0.4
TMEM260-202ENST00000538838 NDUFB4O95168 129 aa17.57■□□□□ 0.4
TMEM260-202ENST00000538838 KRTAP10-11P60412 298 aa17.57■□□□□ 0.4
TMEM260-202ENST00000538838 EGFEM1PQ0D2K5 195 aa17.57■□□□□ 0.4
TMEM260-202ENST00000538838 BEAN1Q3B7T3 259 aa17.57■□□□□ 0.4
TMEM260-202ENST00000538838 LRRC20Q8TCA0 184 aa17.57■□□□□ 0.4
TMEM260-202ENST00000538838 C16orf92Q96LL3 132 aa17.57■□□□□ 0.4
TMEM260-202ENST00000538838 TRAV8-2A0A0B4J237 113 aa17.56■□□□□ 0.4
TMEM260-202ENST00000538838 BLOC1S1P78537 153 aa17.56■□□□□ 0.4
TMEM260-202ENST00000538838 SUN5Q8TC36 379 aa17.56■□□□□ 0.4
TMEM260-202ENST00000538838 ZNF331Q9NQX6 463 aaPredicted RBP17.56■□□□□ 0.4
TMEM260-202ENST00000538838 TMEM167BQ9NRX6 74 aa17.56■□□□□ 0.4
TMEM260-202ENST00000538838 TRAV1-1A0A0B4J248 108 aa17.55■□□□□ 0.4
TMEM260-202ENST00000538838 ZNF688P0C7X2 276 aa17.55■□□□□ 0.4
TMEM260-202ENST00000538838 HLA-DMBP28068 263 aa17.55■□□□□ 0.4
TMEM260-202ENST00000538838 PDE6HQ13956 83 aa17.55■□□□□ 0.4
TMEM260-202ENST00000538838 RNF182Q8N6D2 247 aa17.55■□□□□ 0.4
TMEM260-202ENST00000538838 SLC50A1Q9BRV3 221 aa17.55■□□□□ 0.4
TMEM260-202ENST00000538838 NBEAL1Q6ZS30 2694 aa17.55■□□□□ 0.4
TMEM260-202ENST00000538838 ISLRO14498 428 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 CCL20P78556 96 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 ZNF253O75346 499 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 HBE1P02100 147 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 CD7P09564 240 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 PSMB3P49720 205 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 ZNF767PQ75MW2 155 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 C20orf173Q96LM9 149 aa17.54■□□□□ 0.4
TMEM260-202ENST00000538838 NOTCH1P46531 2555 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 TEX46H3BTG2 121 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 UBE2G2P60604 165 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 RANP62826 216 aaKnown RBP17.53■□□□□ 0.4
TMEM260-202ENST00000538838 ODF3L2Q3SX64 289 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 SAMD13Q5VXD3 122 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 EXOC3-AS1Q8N2X6 119 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 LINC00052Q96N35 136 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 PRR25Q96S07 402 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 MAP6D1Q9H9H5 199 aa17.53■□□□□ 0.4
TMEM260-202ENST00000538838 NMBP08949 121 aa17.52■□□□□ 0.4
TMEM260-202ENST00000538838 ID1P41134 155 aa17.52■□□□□ 0.4
TMEM260-202ENST00000538838 CD81P60033 236 aa17.52■□□□□ 0.4
TMEM260-202ENST00000538838 PSMG4Q5JS54 123 aa17.52■□□□□ 0.4
TMEM260-202ENST00000538838 Q9H3A6 140 aa17.52■□□□□ 0.4
TMEM260-202ENST00000538838 SNRPD3P62318 126 aaKnown RBP17.51■□□□□ 0.39
TMEM260-202ENST00000538838 PSG9Q00887 426 aa17.51■□□□□ 0.39
TMEM260-202ENST00000538838 YTHDF2Q9Y5A9 579 aaKnown RBP17.51■□□□□ 0.39
TMEM260-202ENST00000538838 PRB4P10163 310 aaPredicted RBP17.5■□□□□ 0.39
TMEM260-202ENST00000538838 GTSCR1Q86UQ5 136 aa17.5■□□□□ 0.39
TMEM260-202ENST00000538838 DEFB131AP59861 70 aa17.5■□□□□ 0.39
TMEM260-202ENST00000538838 ICAM4Q14773 271 aa17.5■□□□□ 0.39
TMEM260-202ENST00000538838 LYPD6BQ8NI32 183 aa17.5■□□□□ 0.39
TMEM260-202ENST00000538838 WFDC10AQ9H1F0 79 aa17.5■□□□□ 0.39
TMEM260-202ENST00000538838 AAMDCQ9H7C9 122 aa17.5■□□□□ 0.39
TMEM260-202ENST00000538838 GNG13Q9P2W3 67 aa17.5■□□□□ 0.39
TMEM260-202ENST00000538838 DNAH3Q8TD57 4116 aa17.49■□□□□ 0.39
TMEM260-202ENST00000538838 M0R3E3 92 aa17.49■□□□□ 0.39
TMEM260-202ENST00000538838 DEFB1P60022 68 aa17.49■□□□□ 0.39
TMEM260-202ENST00000538838 ZMAT5Q9UDW3 170 aaKnown RBP17.49■□□□□ 0.39
TMEM260-202ENST00000538838 GGTLC3B5MD39 225 aa17.48■□□□□ 0.39
TMEM260-202ENST00000538838 ZNF124Q15973 351 aa17.48■□□□□ 0.39
TMEM260-202ENST00000538838 KPRPQ5T749 579 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-202ENST00000538838 LYPD1Q8N2G4 141 aa17.48■□□□□ 0.39
TMEM260-202ENST00000538838 ZNF738Q8NE65 137 aa17.48■□□□□ 0.39
TMEM260-202ENST00000538838 C19orf73Q9NVV2 129 aa17.48■□□□□ 0.39
TMEM260-202ENST00000538838 FAM74A7A6NL05 159 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 ZNF705FA8MVS1 300 aaPredicted RBP17.47■□□□□ 0.39
TMEM260-202ENST00000538838 OR11H12B2RN74 326 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 PAGE4O60829 102 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 PSG3Q16557 428 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 APRG1Q8IVJ8 170 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 OTORQ9NRC9 128 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 A0A1W2PRE2 83 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 PGPA6NDG6 321 aa17.47■□□□□ 0.39
TMEM260-202ENST00000538838 PPT1P50897 306 aa17.46■□□□□ 0.39
TMEM260-202ENST00000538838 RAB14P61106 215 aa17.46■□□□□ 0.39
TMEM260-202ENST00000538838 MANBALQ9NQG1 85 aa17.46■□□□□ 0.39
TMEM260-202ENST00000538838 RGS13O14921 159 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms