RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CST9LP1Q5W188 147 aa10.72□□□□□ -0.69
CD4-208ENST00000538827 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
CD4-208ENST00000538827 FAM210AQ96ND0 272 aa10.72□□□□□ -0.69
CD4-208ENST00000538827 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
CD4-208ENST00000538827 YTHDF2Q9Y5A9 579 aaKnown RBP10.72□□□□□ -0.69
CD4-208ENST00000538827 HELTA6NFD8 242 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 H3BQ15 152 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 SLC17A3O00476 420 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 SAP30O75446 220 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 VWFP04275 2813 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 CSN3P07498 182 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 NBEAP1P0C6P0 100 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 LINC00482Q8N8I6 264 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 RXFP4Q8TDU9 374 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 TREM1Q9NP99 234 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 MLXQ9UH92 298 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 SMAD5-AS1Q9Y6J3 95 aa10.71□□□□□ -0.69
CD4-208ENST00000538827 A0A087X0K7 114 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 RBFOX3A6NFN3 312 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 ATP5G3P48201 142 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 NDUFA5Q16718 116 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 GBGT1Q8N5D6 347 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 C17orf77Q96MU5 243 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 RARRES2Q99969 163 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 RPH3ALQ9UNE2 315 aa10.7□□□□□ -0.7
CD4-208ENST00000538827 TRBV19A0A075B6N1 114 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 FAM74A7A6NL05 159 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 C11orf94C9JXX5 98 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 TFPI2P48307 235 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 RANP62826 216 aaKnown RBP10.69□□□□□ -0.7
CD4-208ENST00000538827 ICAM4Q14773 271 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 WFDC3Q8IUB2 231 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 Q9H3A6 140 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 MED9Q9NWA0 146 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
CD4-208ENST00000538827 RAB19A4D1S5 217 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 GGTLC3B5MD39 225 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
CD4-208ENST00000538827 CEBPGP53567 150 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 SRSF3P84103 164 aaKnown RBP10.68□□□□□ -0.7
CD4-208ENST00000538827 PEA15Q15121 130 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 IGFL4Q6B9Z1 124 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 SUN5Q8TC36 379 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 C16orf92Q96LL3 132 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 CITED4Q96RK1 184 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 SLC50A1Q9BRV3 221 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 NRN1Q9NPD7 142 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 ARL2-SNX15V9GYD0 113 aa10.68□□□□□ -0.7
CD4-208ENST00000538827 A0A1W2PRE2 83 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
CD4-208ENST00000538827 NDUFB4O95168 129 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 SLC25A5P05141 298 aaKnown RBP10.67□□□□□ -0.7
CD4-208ENST00000538827 CD33P20138 364 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 MEOX2P50222 304 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 PSG9Q00887 426 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
CD4-208ENST00000538827 PDE6HQ13956 83 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 RBPMS2Q6ZRY4 209 aaKnown RBP10.67□□□□□ -0.7
CD4-208ENST00000538827 EXOC3-AS1Q8N2X6 119 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
CD4-208ENST00000538827 PGPA6NDG6 321 aa10.66□□□□□ -0.7
CD4-208ENST00000538827 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
CD4-208ENST00000538827 HLA-DMBP28068 263 aa10.66□□□□□ -0.7
CD4-208ENST00000538827 SUMO1P63165 101 aaKnown RBP10.66□□□□□ -0.7
CD4-208ENST00000538827 GNG5P63218 68 aa10.66□□□□□ -0.7
CD4-208ENST00000538827 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
CD4-208ENST00000538827 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
CD4-208ENST00000538827 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
CD4-208ENST00000538827 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
CD4-208ENST00000538827 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
CD4-208ENST00000538827 ZNF253O75346 499 aa10.65□□□□□ -0.7
CD4-208ENST00000538827 CD5P06127 495 aa10.65□□□□□ -0.7
CD4-208ENST00000538827 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
CD4-208ENST00000538827 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
CD4-208ENST00000538827 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
CD4-208ENST00000538827 UQCC3Q6UW78 93 aa10.65□□□□□ -0.7
CD4-208ENST00000538827 RNF182Q8N6D2 247 aa10.65□□□□□ -0.7
CD4-208ENST00000538827 ZNF331Q9NQX6 463 aaPredicted RBP10.65□□□□□ -0.7
CD4-208ENST00000538827 KMT2CQ8NEZ4 4911 aaKnown RBP10.64□□□□□ -0.71
CD4-208ENST00000538827 F6UZH7 168 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 SRP19P09132 144 aaKnown RBP10.64□□□□□ -0.71
CD4-208ENST00000538827 AKR1C3P42330 323 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 CD81P60033 236 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 PAFAH1B2P68402 229 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 GUCA2BQ16661 112 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 LYPD1Q8N2G4 141 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 LINC00052Q96N35 136 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 TXNDC17Q9BRA2 123 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 SIGLEC8Q9NYZ4 499 aa10.64□□□□□ -0.71
CD4-208ENST00000538827 CMYA5Q8N3K9 4069 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 TRAV8-2A0A0B4J237 113 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 IZUMO1RA6ND01 250 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 M0R3E3 92 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 SOCS3O14543 225 aa10.63□□□□□ -0.71
CD4-208ENST00000538827 PDE6DO43924 150 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms