RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 KLHDC1Q8N7A1 406 aa9.42□□□□□ -0.9
CPNE8-203ENST00000538596 CFHR4Q92496 578 aa9.42□□□□□ -0.9
CPNE8-203ENST00000538596 TMEM70Q9BUB7 260 aa9.42□□□□□ -0.9
CPNE8-203ENST00000538596 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
CPNE8-203ENST00000538596 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
CPNE8-203ENST00000538596 ITPR1Q14643 2758 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 LINC00614P0C842 121 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 LY6G5BQ8NDX9 201 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 OR4F17Q8NGA8 305 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 C8orf49Q96NF6 230 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 DPM3Q9P2X0 92 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 NDPQ00604 133 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 DYNAPQ8N1N2 210 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 ZNF414Q96IQ9 312 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 PSG8Q9UQ74 426 aa9.41□□□□□ -0.9
CPNE8-203ENST00000538596 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.9
CPNE8-203ENST00000538596 TMSB15BA0A087X1C1 80 aa9.4□□□□□ -0.9
CPNE8-203ENST00000538596 hDV102S1A0JD36 115 aa9.4□□□□□ -0.9
CPNE8-203ENST00000538596 OR4C46A6NHA9 309 aa9.4□□□□□ -0.9
CPNE8-203ENST00000538596 CCL21O00585 134 aa9.4□□□□□ -0.9
CPNE8-203ENST00000538596 MRPS12O15235 138 aaKnown RBP9.4□□□□□ -0.9
CPNE8-203ENST00000538596 MUC21A0A0G2JKD1 596 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 MUC21A0A140T8X8 626 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 LEPROTL1O95214 131 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 MUC21Q5SSG8 566 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 FANCD2OSQ96PS1 177 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 RNF5Q99942 180 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 PMCHL2Q9BQD1 86 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 TMUB1Q9BVT8 246 aa9.4□□□□□ -0.91
CPNE8-203ENST00000538596 SOX21Q9Y651 276 aaPredicted RBP9.4□□□□□ -0.91
CPNE8-203ENST00000538596 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
CPNE8-203ENST00000538596 SYS1-DBNDD2H3BUS1 97 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 HAX1O00165 279 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 GNG7O60262 68 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 COL12A1Q99715 3063 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
CPNE8-203ENST00000538596 PSG3Q16557 428 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 IGFL4Q6B9Z1 124 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 NDFIP1Q9BT67 221 aa9.39□□□□□ -0.91
CPNE8-203ENST00000538596 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
CPNE8-203ENST00000538596 C5orf64Q2M2E5 130 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 UNQ5815/PRO19632Q6UWF5 114 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 OR11H6Q8NGC7 330 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 WI2-2373I1.2A0A1W2PRP0 233 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
CPNE8-203ENST00000538596 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 MAP1AP78559 2803 aaPredicted RBP9.38□□□□□ -0.91
CPNE8-203ENST00000538596 LOC105371242A0A075B767 164 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 NDUFA3O95167 84 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 GAGE1Q13065 139 aa9.38□□□□□ -0.91
CPNE8-203ENST00000538596 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
CPNE8-203ENST00000538596 OR2T8A6NH00 312 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
CPNE8-203ENST00000538596 FAM106CPP0CH98 169 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 FOSL1P15407 271 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 FAM106AQ4KMX7 169 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 NPBQ8NG41 125 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
CPNE8-203ENST00000538596 ADORA2A-AS1P86434 159 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
CPNE8-203ENST00000538596 RAB1BQ9H0U4 201 aa9.37□□□□□ -0.91
CPNE8-203ENST00000538596 ODF3BA8MYP8 253 aa9.36□□□□□ -0.91
CPNE8-203ENST00000538596 NEU4Q8WWR8 484 aaPredicted RBP9.36□□□□□ -0.91
CPNE8-203ENST00000538596 ARPC1AQ92747 370 aa9.36□□□□□ -0.91
CPNE8-203ENST00000538596 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
CPNE8-203ENST00000538596 TMEM213A2RRL7 107 aa9.36□□□□□ -0.91
CPNE8-203ENST00000538596 K7EQM0 130 aa9.36□□□□□ -0.91
CPNE8-203ENST00000538596 TCF21O43680 179 aa9.36□□□□□ -0.91
CPNE8-203ENST00000538596 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
CPNE8-203ENST00000538596 Q8TAT8 98 aa9.36□□□□□ -0.91
CPNE8-203ENST00000538596 TRBV6-1A0A0K0K1D8 114 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 NDUFS7O75251 213 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 CEACAM3P40198 252 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 MFAP4P55083 255 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 FAM162BQ5T6X4 162 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 VMO1Q7Z5L0 202 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 TIMD4Q96H15 378 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 SERTM2A0A1B0GWG4 89 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 PRTN3P24158 256 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 ZFP36P26651 326 aaKnown RBP9.35□□□□□ -0.91
CPNE8-203ENST00000538596 FXYD7P58549 80 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 LOXL1Q08397 574 aaPredicted RBP9.35□□□□□ -0.91
CPNE8-203ENST00000538596 RIGQ13278 110 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 FBXL19-AS1Q494R0 122 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 LYZL1Q6UWQ5 148 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 ERASQ7Z444 233 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 C21orf62Q9NYP8 219 aa9.35□□□□□ -0.91
CPNE8-203ENST00000538596 ZNF562Q6V9R5 426 aa9.34□□□□□ -0.91
CPNE8-203ENST00000538596 LYPD1Q8N2G4 141 aa9.34□□□□□ -0.91
CPNE8-203ENST00000538596 AAMDCQ9H7C9 122 aa9.34□□□□□ -0.91
CPNE8-203ENST00000538596 RNF24Q9Y225 148 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms