RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 IFI27L1Q96BM0 104 aa14.77□□□□□ -0.05
SFSWAP-207ENST00000538548 PPIAL4CA0A0B4J2A2 164 aa14.76□□□□□ -0.05
SFSWAP-207ENST00000538548 PAX8Q06710 450 aa14.76□□□□□ -0.05
SFSWAP-207ENST00000538548 SRSF6Q13247 344 aaKnown RBP14.76□□□□□ -0.05
SFSWAP-207ENST00000538548 ORMDL3Q8N138 153 aa14.76□□□□□ -0.05
SFSWAP-207ENST00000538548 PRR33A8MZF0 331 aa14.76□□□□□ -0.05
SFSWAP-207ENST00000538548 TNFAIP6P98066 277 aaPredicted RBP14.76□□□□□ -0.05
SFSWAP-207ENST00000538548 TPSG1Q9NRR2 321 aa14.76□□□□□ -0.05
SFSWAP-207ENST00000538548 FAM104BQ5XKR9 115 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 SLC25A39Q9BZJ4 359 aaPredicted RBP14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 SERTM2A0A1B0GWG4 89 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 AZU1P20160 251 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 LYZP61626 148 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 DIAPH2-AS1Q14236 149 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 PIFOQ8TCI5 191 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 SIGMAR1Q99720 223 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 PROCRQ9UNN8 238 aa14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 F11RQ9Y624 299 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-207ENST00000538548 ICE1Q9Y2F5 2266 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 K7EQM0 130 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 M0R1B8 84 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 MRGPRG-AS1Q2M3A8 158 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 PSMG4Q5JS54 123 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 PSG8Q9UQ74 426 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 CRIP1P50238 77 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 TEX36Q5VZQ5 186 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 HIGD1BQ9P298 99 aa14.74□□□□□ -0.05
SFSWAP-207ENST00000538548 IGHV3-21A0A0B4J1V1 117 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 NKX2-8O15522 239 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 CCL3L1P16619 93 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 FCGR2BP31994 310 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 AMN1Q8IY45 258 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 VGLL1Q99990 258 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 SMPXQ9UHP9 88 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 GOSR1O95249 250 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 IGHV1-46P01743 117 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 FTH1P19P0C7X4 201 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 GCSHP23434 173 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 PSG3Q16557 428 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 TM4SF20Q53R12 229 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 GTSF1LQ9H1H1 148 aa14.73□□□□□ -0.05
SFSWAP-207ENST00000538548 ANKRD11Q6UB99 2663 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-207ENST00000538548 FXYD7P58549 80 aa14.72□□□□□ -0.05
SFSWAP-207ENST00000538548 BCL6BQ8N143 479 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-207ENST00000538548 TRBV19A0A075B6N1 114 aa14.72□□□□□ -0.05
SFSWAP-207ENST00000538548 NDUFS7O75251 213 aa14.72□□□□□ -0.05
SFSWAP-207ENST00000538548 FXYD2P54710 66 aa14.72□□□□□ -0.05
SFSWAP-207ENST00000538548 SPTBN4Q9H254 2564 aa14.71□□□□□ -0.05
SFSWAP-207ENST00000538548 TMEM213A2RRL7 107 aa14.71□□□□□ -0.05
SFSWAP-207ENST00000538548 LYZL1Q6UWQ5 148 aa14.71□□□□□ -0.05
SFSWAP-207ENST00000538548 DKK2Q9UBU2 259 aa14.71□□□□□ -0.05
SFSWAP-207ENST00000538548 RPL27AP46776 148 aaKnown RBP14.71□□□□□ -0.06
SFSWAP-207ENST00000538548 MRPL51Q4U2R6 128 aaKnown RBP14.71□□□□□ -0.06
SFSWAP-207ENST00000538548 LINC00311Q8N616 119 aa14.71□□□□□ -0.06
SFSWAP-207ENST00000538548 RITA1Q96K30 269 aa14.71□□□□□ -0.06
SFSWAP-207ENST00000538548 ASCL2Q99929 193 aa14.71□□□□□ -0.06
SFSWAP-207ENST00000538548 MC5RP33032 325 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 SMAGPQ0VAQ4 97 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 TCF15Q12870 199 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 CD300EQ496F6 205 aaPredicted RBP14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 NGBQ9NPG2 151 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 PLCE1Q9P212 2302 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 SHISA9B4DS77 424 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 SIGLEC15Q6ZMC9 328 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 LYPD1Q8N2G4 141 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 C8orf31Q8N9H6 132 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 SCNM1Q9BWG6 230 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 ABCA1O95477 2261 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 ZZEF1O43149 2961 aa14.7□□□□□ -0.06
SFSWAP-207ENST00000538548 PPIAL4EA0A075B759 164 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 PPIAL4FP0DN26 164 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 BMI1P35226 326 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 TMEM200BQ69YZ2 307 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 PHLDA1Q8WV24 401 aaPredicted RBP14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 APC2O95996 2303 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 ACACAQ13085 2346 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 A0A1B0GV72 72 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 J3QR89 54 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 APELAP0DMC3 54 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 CHAC1Q9BUX1 264 aa14.69□□□□□ -0.06
SFSWAP-207ENST00000538548 WI2-2373I1.2A0A1W2PRP0 233 aa14.68□□□□□ -0.06
SFSWAP-207ENST00000538548 FOXI2Q6ZQN5 318 aa14.68□□□□□ -0.06
SFSWAP-207ENST00000538548 SVIPQ8NHG7 77 aa14.68□□□□□ -0.06
SFSWAP-207ENST00000538548 GAGE12HA6NDE8 117 aa14.68□□□□□ -0.06
SFSWAP-207ENST00000538548 FBLL1A6NHQ2 334 aaKnown RBP14.68□□□□□ -0.06
SFSWAP-207ENST00000538548 C17orf77Q96MU5 243 aa14.68□□□□□ -0.06
SFSWAP-207ENST00000538548 F8W1H4 67 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 CKS2P33552 79 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 RASL11BQ9BPW5 248 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 TMEM133Q9H2Q1 129 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 TSSC4Q9Y5U2 329 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 IGKV2D-26A0A0A0MRZ7 120 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 K7ERJ3 54 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 NPYP01303 97 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 THBDP07204 575 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 SHANK2-AS3Q9BTD1 123 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 ZMAT4Q9H898 229 aa14.67□□□□□ -0.06
SFSWAP-207ENST00000538548 K7EM74 188 aa14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 ENSAO43768 121 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 PRSS33Q8NF86 280 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms