RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZFP30Q9Y2G7 519 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 IGHV4-61A0A0C4DH41 118 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 A0A1W2PS18 150 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 LINC01548A6NM66 108 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 A8MWP6 167 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 SCGB2A1O75556 95 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 COL8A1P27658 744 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 C15orf32Q32M92 178 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 C5orf56Q8N8D9 126 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 C14orf144Q96I85 54 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 SSBP4Q9BWG4 385 aaPredicted RBP10.91□□□□□ -0.66
LIMK1-208ENST00000538333 SAMD10Q9BYL1 202 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 PSG8Q9UQ74 426 aa10.91□□□□□ -0.66
LIMK1-208ENST00000538333 SOX21Q9Y651 276 aaPredicted RBP10.91□□□□□ -0.66
LIMK1-208ENST00000538333 COL12A1Q99715 3063 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 K7EQM0 130 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 CAMPP49913 170 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 HBBP68871 147 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 DEFA6Q01524 100 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 RBPMS2Q6ZRY4 209 aaKnown RBP10.9□□□□□ -0.66
LIMK1-208ENST00000538333 C10orf105Q8TEF2 133 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
LIMK1-208ENST00000538333 CCL19Q99731 98 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 PIMREGQ9BSJ6 248 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 SH2D7A6NKC9 451 aaPredicted RBP10.9□□□□□ -0.66
LIMK1-208ENST00000538333 G3V318 75 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
LIMK1-208ENST00000538333 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
LIMK1-208ENST00000538333 RHOGP84095 191 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 NOL4LQ96MY1 436 aaPredicted RBP10.9□□□□□ -0.66
LIMK1-208ENST00000538333 RABAC1Q9UI14 185 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 RNF114Q9Y508 228 aa10.9□□□□□ -0.66
LIMK1-208ENST00000538333 SPTAN1Q13813 2472 aaKnown RBP10.89□□□□□ -0.67
LIMK1-208ENST00000538333 PRB1P04280 392 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 GPR183P32249 361 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
LIMK1-208ENST00000538333 KLF5Q13887 457 aaPredicted RBP10.89□□□□□ -0.67
LIMK1-208ENST00000538333 SIGLECL1Q8N7X8 197 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 PIFOQ8TCI5 191 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 PGLYRP4Q96LB8 373 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 ASCL2Q99929 193 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 ALKBH7Q9BT30 221 aaPredicted RBP10.89□□□□□ -0.67
LIMK1-208ENST00000538333 AAMDCQ9H7C9 122 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 SMAD5-AS1Q9Y6J3 95 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 IGHV1-69DA0A0B4J2H0 117 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 ZNF324O75467 553 aaPredicted RBP10.89□□□□□ -0.67
LIMK1-208ENST00000538333 IGHV1-69P01742 117 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 APOHP02749 345 aaPredicted RBP10.89□□□□□ -0.67
LIMK1-208ENST00000538333 CRIP1P50238 77 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 CCDC140Q96MF4 163 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
LIMK1-208ENST00000538333 NDUFS8O00217 210 aa10.88□□□□□ -0.67
LIMK1-208ENST00000538333 RNF224P0DH78 156 aa10.88□□□□□ -0.67
LIMK1-208ENST00000538333 AMTP48728 403 aa10.88□□□□□ -0.67
LIMK1-208ENST00000538333 PSG9Q00887 426 aa10.88□□□□□ -0.67
LIMK1-208ENST00000538333 TOMM20LQ6UXN7 152 aa10.88□□□□□ -0.67
LIMK1-208ENST00000538333 REC114Q7Z4M0 266 aa10.88□□□□□ -0.67
LIMK1-208ENST00000538333 ARL6IP6Q8N6S5 226 aa10.88□□□□□ -0.67
LIMK1-208ENST00000538333 IGHV3OR16-10A0A075B7F0 116 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 IGHV3-35A0A0C4DH35 117 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 CLEC3BP05452 202 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 TEX43Q6ZNM6 134 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 TMEM219Q86XT9 240 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 KIR2DL5BA0A0G2JN68 375 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 KIR2DL5BA0A0G2JPC4 375 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 IGHG4P01861 327 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 C19orf54Q5BKX5 351 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 KIR2DL5AQ8N109 375 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 NRN1Q9NPD7 142 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 MOB4Q9Y3A3 225 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 FAM208BQ5VWN6 2430 aa10.87□□□□□ -0.67
LIMK1-208ENST00000538333 TRAV40A0A0B4J280 105 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 DOPEY1Q5JWR5 2465 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 BRD3OSQ6XYD6 125 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 NIT1Q86X76 327 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 C8orf49Q96NF6 230 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 MEGF9Q9H1U4 602 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 IGHV4-30-2A0A087WSY4 118 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 HAX1O00165 279 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 PMCHP20382 165 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 CSN1S1P47710 185 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 PRR31Q5SQ13 230 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 COX8CQ7Z4L0 72 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 Q8N976 141 aa10.86□□□□□ -0.67
LIMK1-208ENST00000538333 CELSR1Q9NYQ6 3014 aa10.85□□□□□ -0.67
LIMK1-208ENST00000538333 ZNF462Q96JM2 2506 aa10.85□□□□□ -0.67
LIMK1-208ENST00000538333 ZNF705FA8MVS1 300 aaPredicted RBP10.85□□□□□ -0.67
LIMK1-208ENST00000538333 ZNF705DP0CH99 300 aaPredicted RBP10.85□□□□□ -0.67
LIMK1-208ENST00000538333 ZNF705BP0CI00 300 aaPredicted RBP10.85□□□□□ -0.67
LIMK1-208ENST00000538333 CRIP2P52943 208 aaPredicted RBP10.85□□□□□ -0.67
LIMK1-208ENST00000538333 ATP5J2P56134 94 aa10.85□□□□□ -0.67
LIMK1-208ENST00000538333 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
LIMK1-208ENST00000538333 FAM19A2Q8N3H0 131 aa10.85□□□□□ -0.67
LIMK1-208ENST00000538333 NDUFAF3Q9BU61 184 aa10.85□□□□□ -0.67
LIMK1-208ENST00000538333 IGKV2-40A0A087WW87 121 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms