RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TTC9CQ8N5M4 171 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 KLHL30-AS1Q8NEE0 82 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 SLC24A4Q8NFF2 622 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 OR4F17Q8NGA8 305 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 OR1P1Q8NH06 330 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 SPATA3Q8NHX4 192 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 RNASEH2CQ8TDP1 164 aaKnown RBP3.33□□□□□ -1.88
SNHG1-208ENST00000538266 DTD1Q8TEA8 209 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 C4orf3Q8WVX3 66 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 MBD3L1Q8WWY6 194 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 FRZBQ92765 325 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 PINX1Q96BK5 328 aaKnown RBP3.33□□□□□ -1.88
SNHG1-208ENST00000538266 C14orf144Q96I85 54 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 USMG5Q96IX5 58 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 UBE2E2Q96LR5 201 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 OR5B12Q96R08 314 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 OR4F4Q96R69 305 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 HIST1H2BLQ99880 126 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 CITED1Q99966 193 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 SMIM7Q9BQ49 75 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 C2orf88Q9BSF0 95 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 GPR61Q9BZJ8 451 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 MAP1LC3BQ9GZQ8 125 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 RBKSQ9H477 322 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 SRD5A3Q9H8P0 318 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 SDF2L1Q9HCN8 221 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 TIMM9Q9Y5J7 89 aa3.33□□□□□ -1.88
SNHG1-208ENST00000538266 F11RQ9Y624 299 aaKnown RBP3.33□□□□□ -1.88
SNHG1-208ENST00000538266 TET2Q6N021 2002 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-208ENST00000538266 PLXNB1O43157 2135 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 TNCP24821 2201 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 SETD2Q9BYW2 2564 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-208ENST00000538266 IGLV11-55A0A075B6I3 123 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 TRBV7-1A0A0A6YYK4 115 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 A0A1B0GV90 55 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 PPP5D1E7EU14 171 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 INS-IGF2F8WCM5 200 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM250H0YL14 139 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 H7BYZ3 331 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 SYNGR2O43760 224 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 OR2J3O76001 311 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 BRI3O95415 125 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM50AO95807 157 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 GCGP01275 180 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 IGHV3-11P01762 117 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 MBP02144 154 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 CRYGCP07315 174 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 IAPPP10997 89 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 NPY1RP25929 384 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 HOXD3P31249 432 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-208ENST00000538266 OPRK1P41145 380 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 PSMB3P49720 205 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ATP5IP56385 69 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-208ENST00000538266 SERF2P84101 59 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 SLC38A11Q08AI6 406 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 JOSD1Q15040 202 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ADIRFQ15847 76 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ACOT6Q3I5F7 207 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-208ENST00000538266 TCTEX1D4Q5JR98 221 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 COA6Q5JTJ3 125 aaKnown RBP3.32□□□□□ -1.88
SNHG1-208ENST00000538266 GFI1BQ5VTD9 330 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ETFRF1Q6IPR1 90 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 KCNIP4Q6PIL6 250 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF491Q8N8L2 437 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF114Q8NC26 417 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 EEF1AKMT3Q96AZ1 226 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM18Q96B42 140 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ACY3Q96HD9 319 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 NDUFAF3Q9BU61 184 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 PRO1933Q9H354 126 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 MANBALQ9NQG1 85 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 PEMTQ9UBM1 199 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 RFNGQ9Y644 331 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 MXRA5Q9NR99 2828 aa3.32□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF469Q96JG9 3925 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-208ENST00000538266 TRBV9A0A0B4J1U6 114 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 CTXND1A0A1B0GTU2 59 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 UBE2L5PA0A1B0GUS4 154 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 XKRY2A2RUG3 117 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 H3BP45 60 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 CCL24O00175 119 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 PHOX2AO14813 284 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 GNG7O60262 68 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 MT-CO2P00403 227 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 AMBPP02760 352 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 LGALS1P09382 135 aaKnown RBP3.31□□□□□ -1.88
SNHG1-208ENST00000538266 RNASE2P10153 161 aaKnown RBP3.31□□□□□ -1.88
SNHG1-208ENST00000538266 GALR1P47211 349 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 PAX9P55771 341 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 KRTAP10-3P60369 221 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 MEF2BQ02080 365 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-208ENST00000538266 IQCJQ1A5X6 159 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM241Q24JQ0 296 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 DEFB136Q30KP8 78 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 BSXQ3C1V8 233 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 C2orf83Q53S99 150 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 Q56UQ5 140 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 ACTL10Q5JWF8 245 aa3.31□□□□□ -1.88
SNHG1-208ENST00000538266 SPANXN5Q5MJ07 72 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms