RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CFAP46Q8IYW2 2715 aa2.81□□□□□ -1.96
PTPN22-211ENST00000538253 PRR14LQ5THK1 2151 aa2.81□□□□□ -1.96
PTPN22-211ENST00000538253 F8P00451 2351 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 ITPR1Q14643 2758 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TEX50A0A1B0GTY4 177 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 B4DEV8 164 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 CCL24O00175 119 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 IGHV3-7P01780 117 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 MDKP21741 143 aaPredicted RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 G6PCP35575 357 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 OPRK1P41145 380 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 P2RY1P47900 373 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TAS2R45P59539 299 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 ELOBQ15370 118 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TMEM183BQ1AE95 376 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 NMSQ5H8A3 153 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 SOHLH1Q5JUK2 328 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 FAM162BQ5T6X4 162 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TMEM78Q5T7P6 136 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 Q6ZRG5 221 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF491Q8N8L2 437 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 IL17DQ8TAD2 202 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TMEM18Q96B42 140 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TMEM147Q9BVK8 224 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 SERTAD4Q9NUC0 356 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 PSENENQ9NZ42 101 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 DSPP15924 2871 aaKnown RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 IGKV1D-8A0A087WSZ0 117 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 MDFIC2A0A1B0GVS7 189 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 LINC00473A8K010 186 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 DEDDO75618 318 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 IGLV2-23P01705 113 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 RPL7P18124 248 aaKnown RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 PSMB8P28062 276 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 GALR1P47211 349 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 RHOBP62745 196 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 CT83Q5H943 113 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TEX43Q6ZNM6 134 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 FA2HQ7L5A8 372 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 GTSCR1Q86UQ5 136 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 OR4X1Q8NH49 305 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 RTBDNQ9BSG5 229 aaPredicted RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 FABP5P3A8MUU1 101 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TAX1BP3O14907 124 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 NPPCP23582 126 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 HNRNPA3P51991 378 aaKnown RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 RPL30P62888 115 aaKnown RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 PPP1R1AQ13522 171 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 COA6Q5JTJ3 125 aaKnown RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 MYOZ3Q8TDC0 251 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 GNPNAT1Q96EK6 184 aaPredicted RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TRGV9Q99603 122 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF471Q9BX82 626 aaPredicted RBP2.8□□□□□ -1.96
PTPN22-211ENST00000538253 GNB4Q9HAV0 340 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 NPVFQ9HCQ7 196 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 ESM1Q9NQ30 184 aa2.8□□□□□ -1.96
PTPN22-211ENST00000538253 TRBV9A0A0B4J1U6 114 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 TINCRA0A1B0GVN0 87 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 KANTRA0A1W2PQU2 76 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 ZFP92A6NM28 416 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 C15orf62A8K5M9 175 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 PSG9Q00887 426 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 NSUN5P1Q3KNT7 163 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 Q6ZN92 141 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 LCNL1Q6ZST4 164 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 DYNAPQ8N1N2 210 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 WFDC9Q8NEX5 89 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 VAMP8Q9BV40 100 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 UQCR10Q9UDW1 63 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 DMXL1Q9Y485 3027 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 DOCK11Q5JSL3 2073 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 MED13LQ71F56 2210 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 IGLV11-55A0A075B6I3 123 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 A0A1B0GW64 132 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 ZNF727A8MUV8 499 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 IGKV1-16P04430 117 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 PPIFP30405 207 aaKnown RBP2.79□□□□□ -1.96
PTPN22-211ENST00000538253 BLCAPP62952 87 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 ID3Q02535 119 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 CFHR3Q02985 330 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 CD69Q07108 199 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 LCE2AQ5TA79 106 aaPredicted RBP2.79□□□□□ -1.96
PTPN22-211ENST00000538253 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
PTPN22-211ENST00000538253 DNAJC30Q96LL9 226 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 DAZ1Q9NQZ3 744 aaKnown RBP2.79□□□□□ -1.96
PTPN22-211ENST00000538253 RABAC1Q9UI14 185 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 CFAP54Q96N23 3096 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 IGLC7A0M8Q6 106 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE12JA6NER3 117 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 BCL2L11O43521 198 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE7O76087 117 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 NHLRC4P0CG21 123 aaPredicted RBP2.79□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE12FP0CL80 117 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE12GP0CL81 117 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE12IP0CL82 117 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 NTF3P20783 257 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 GAGE4Q13068 117 aa2.79□□□□□ -1.96
PTPN22-211ENST00000538253 C15orf32Q32M92 178 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms