RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CHTOPQ9Y3Y2 248 aaKnown RBP4.3□□□□□ -1.72
LRP6-203ENST00000538239 STAG3L3P0CL85 134 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 PAX9P55771 341 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 NPC2P61916 151 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 C14orf178Q8N769 122 aaPredicted RBP4.29□□□□□ -1.72
LRP6-203ENST00000538239 PMCHL2Q9BQD1 86 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 PGPEP1Q9NXJ5 209 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 DKK4Q9UBT3 224 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 ACACAQ13085 2346 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 POLEQ07864 2286 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 SMIM6P0DI80 62 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 FABP2P12104 132 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 LINC00158P58513 81 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 TMEM14EPQ6UXP3 125 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 VOPP1Q96AW1 172 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 LSM4Q9Y4Z0 139 aaKnown RBP4.29□□□□□ -1.72
LRP6-203ENST00000538239 CACNA1GO43497 2377 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 CCL24O00175 119 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 Q6ZRM9 215 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 GAGE12BA1L429 117 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 GAGE7O76087 117 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 GAGE12FP0CL80 117 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 GAGE12GP0CL81 117 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 GAGE12IP0CL82 117 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 Q6ZS49 121 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 C8orf86Q6ZUL3 223 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 OR5A1Q8NGJ0 315 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 C8orf49Q96NF6 230 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 SHANK2-AS3Q9BTD1 123 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 DERL1Q9BUN8 251 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 ZNF407Q9C0G0 2248 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 ITGB1BP1O14713 200 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 HIST2H2BCQ6DN03 193 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 TSKUQ8WUA8 353 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 AGMATQ9BSE5 352 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 NDUFA4L2Q9NRX3 87 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 OBSL1O75147 1896 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 A0A096LPF7 62 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 ZNF134P52741 427 aa4.29□□□□□ -1.72
LRP6-203ENST00000538239 NXT2Q9NPJ8 142 aaKnown RBP4.29□□□□□ -1.72
LRP6-203ENST00000538239 AZU1P20160 251 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 ORMDL2Q53FV1 153 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 MRPL16Q9NX20 251 aaKnown RBP4.28□□□□□ -1.72
LRP6-203ENST00000538239 UQCR10Q9UDW1 63 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 LRRK1Q38SD2 2015 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 C15orf65H3BRN8 121 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 GAGE1Q13065 139 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 GAGE4Q13068 117 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 GAGE5Q13069 117 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 RSPO1Q2MKA7 263 aaPredicted RBP4.28□□□□□ -1.72
LRP6-203ENST00000538239 GAGE13Q4V321 117 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 C10orf105Q8TEF2 133 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 TMEM14BQ9NUH8 114 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 KIAA2026Q5HYC2 2103 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 D6R8Y8 96 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 WISP2O76076 250 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 APOMO95445 188 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 Q8NA96 180 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 NDUFA4O00483 81 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 SSBP2P81877 361 aaPredicted RBP4.28□□□□□ -1.72
LRP6-203ENST00000538239 FOXL1Q12952 345 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 LAGE3Q14657 143 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 TRAV2A0A0B4J234 112 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 SLC25A20O43772 301 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 C1orf159Q96HA4 380 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 CSTL1Q9H114 145 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 TRAV9-1A0A075B6T8 112 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 CGB3P0DN86 165 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 SLURP1P55000 103 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 PET117Q6UWS5 81 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 MBD3L1Q8WWY6 194 aa4.28□□□□□ -1.72
LRP6-203ENST00000538239 HEATR5AQ86XA9 2040 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 CENPVL3A0A0U1RRI6 287 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 GAGE10A6NGK3 116 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 HBDP02042 147 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 ELANEP08246 267 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 LINC00311Q8N616 119 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 DOCK7Q96N67 2140 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 DENND4AQ7Z401 1863 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 SMKR1H3BMG3 65 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 LINC00614P0C842 121 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 S100A7L2Q5SY68 101 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 DMRTA1Q5VZB9 504 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 RSPO3Q9BXY4 272 aaPredicted RBP4.27□□□□□ -1.73
LRP6-203ENST00000538239 TRAV13-1A0A0B4J241 112 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 FGF16O43320 207 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 RPP25LQ8N5L8 163 aaKnown RBP4.27□□□□□ -1.73
LRP6-203ENST00000538239 SERF1AO75920 110 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 CD300EQ496F6 205 aaPredicted RBP4.27□□□□□ -1.73
LRP6-203ENST00000538239 ZNF843Q8N446 348 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 KAAG1Q9UBP8 84 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 C19orf84I3L1E1 186 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 PPBPP02775 128 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 COL5A1-AS1Q5SY13 56 aa4.27□□□□□ -1.73
LRP6-203ENST00000538239 NIT1Q86X76 327 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms