RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ERVFC1-1P60608 527 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 C9orf66Q5T8R8 295 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 MORN5Q5VZ52 161 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 BAGE2Q86Y30 109 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 PUSL1Q8N0Z8 303 aaKnown RBP5.55□□□□□ -1.52
MSH6-209ENST00000538136 DUXBA0A1W2PPF3 345 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 FAM90A26D6RGX4 464 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 ITGB1BP1O14713 200 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 BCL2L11O43521 198 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 ATP6V1FQ16864 119 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 C2orf83Q53S99 150 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 RPP25LQ8N5L8 163 aaKnown RBP5.55□□□□□ -1.52
MSH6-209ENST00000538136 ZMAT4Q9H898 229 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 A0A0J9YY99 117 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 H0Y8G0 127 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 ATP5G3P48201 142 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 LINC00299Q6ZSB3 139 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 NIPSNAP3BQ9BS92 247 aa5.55□□□□□ -1.52
MSH6-209ENST00000538136 IGLV11-55A0A075B6I3 123 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 NDUFA3O95167 84 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 GCGP01275 180 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 PAX5Q02548 391 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 TMEM183BQ1AE95 376 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 SPSB3Q6PJ21 355 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 TMEM183AQ8IXX5 376 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 SLC35B3Q9H1N7 401 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 MS4A6AQ9H2W1 248 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 NRN1Q9NPD7 142 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 IGKV1OR2-108A0A075B7D4 117 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 NUDT3O95989 172 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 LYL1P12980 280 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 PAX9P55771 341 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 BSXQ3C1V8 233 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 TTC9CQ8N5M4 171 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 TMEM86BQ8N661 226 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 RARRES2Q99969 163 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 RPS10P5Q9NQ39 176 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 TNFSF18Q9UNG2 199 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 TRGV1A0A0A0MS02 117 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 ZNF415Q09FC8 603 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 FAM159AQ6UWV7 190 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 REC114Q7Z4M0 266 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 TMEM75Q8N9X5 138 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 PHYHIPLQ96FC7 376 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 Q9H3A6 140 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 SMPXQ9UHP9 88 aa5.54□□□□□ -1.52
MSH6-209ENST00000538136 F5H768 121 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 HIST1H1EP10412 219 aaKnown RBP5.53□□□□□ -1.52
MSH6-209ENST00000538136 NDUFA11Q86Y39 141 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 ZNF502Q8TBZ5 544 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 ZNF256Q9Y2P7 627 aaPredicted RBP5.53□□□□□ -1.52
MSH6-209ENST00000538136 ELOA3CA0A087WX78 387 aaPredicted RBP5.53□□□□□ -1.52
MSH6-209ENST00000538136 MBP02144 154 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 EGR2P11161 476 aaPredicted RBP5.53□□□□□ -1.52
MSH6-209ENST00000538136 MYCNOSP40205 109 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 OR2D3Q8NGH3 330 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 IGHV7-4-1A0A0J9YVY3 117 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 ZNF705GA8MUZ8 300 aaPredicted RBP5.53□□□□□ -1.52
MSH6-209ENST00000538136 SMIM17P0DL12 118 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 PSMB8P28062 276 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 SPANXN1Q5VSR9 72 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 PQLC2Q6ZP29 291 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 WIPF2Q8TF74 440 aaPredicted RBP5.53□□□□□ -1.52
MSH6-209ENST00000538136 TMEM37Q8WXS4 190 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 GAGE12BA1L429 117 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 SNURFLB1AK76 121 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 GAGE7O76087 117 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 CSN3P07498 182 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 GAGE12FP0CL80 117 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 GAGE12GP0CL81 117 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 GAGE12IP0CL82 117 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 GZMBP10144 247 aa5.53□□□□□ -1.52
MSH6-209ENST00000538136 RNF222A6NCQ9 220 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 CLDN34H7C241 214 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 I3L2K1 104 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 GNG4P50150 75 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 UBE2DNLQ8IWF7 75 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 ZNF680Q8NEM1 530 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 ATG101Q9BSB4 218 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 WDR83OSQ9Y284 106 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 PITX3O75364 302 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 HBE1P02100 147 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 CCL20P78556 96 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 PVRIGQ6DKI7 326 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 COMMD7Q86VX2 200 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 FUT9Q9Y231 359 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 RAB19A4D1S5 217 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 TAAR5O14804 337 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 GCHFRP30047 84 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 GPX4P36969 197 aaPredicted RBP5.52□□□□□ -1.53
MSH6-209ENST00000538136 NDUFA6P56556 154 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 KRTAP10-3P60369 221 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 KIR3DS1Q14943 382 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 MRPL54Q6P161 138 aaKnown RBP5.52□□□□□ -1.53
MSH6-209ENST00000538136 C4orf3Q8WVX3 66 aa5.52□□□□□ -1.53
MSH6-209ENST00000538136 MRPL27Q9P0M9 148 aaKnown RBP5.52□□□□□ -1.53
MSH6-209ENST00000538136 WI2-2373I1.2A0A1W2PRP0 233 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 KRBOX1C9JBD0 128 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 TMEM262E9PQX1 116 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms