RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 C22orf46C9J442 243 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 PRB1P04280 392 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 CD7P09564 240 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 HERV-K104P63124 156 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 NMSQ5H8A3 153 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 WIPF3A6NGB9 483 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 ZNF497Q6ZNH5 498 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 KLF14Q8TD94 323 aaPredicted RBP4.68□□□□□ -1.66
CSMD1-215ENST00000537824 C15orf61A6NNL5 157 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 UPK2O00526 184 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 C3orf36Q3SXR2 165 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 SCARF2Q96GP6 870 aaPredicted RBP4.68□□□□□ -1.66
CSMD1-215ENST00000537824 SPSB3Q6PJ21 355 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 SAA2-SAA4A0A096LPE2 208 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 SAA2P0DJI9 122 aaPredicted RBP4.68□□□□□ -1.66
CSMD1-215ENST00000537824 WFDC2Q14508 124 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 LHFPL1Q86WI0 220 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 PNRC2Q9NPJ4 139 aaKnown RBP4.68□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM74BQ9NUR3 256 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 C9orf172C9J069 976 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 CT83Q5H943 113 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 LIME1Q9H400 295 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 NHSL1Q5SYE7 1610 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 PLA2G2FQ9BZM2 168 aa4.68□□□□□ -1.66
CSMD1-215ENST00000537824 TRGV3P03979 118 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 PILRAQ9UKJ1 303 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 IGKV1-5P01602 117 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 SLC25A16P16260 332 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 DUSP15Q9H1R2 295 aaPredicted RBP4.67□□□□□ -1.66
CSMD1-215ENST00000537824 WDR83OSQ9Y284 106 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 CENPEQ02224 2701 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 MYMXA0A1B0GTQ4 84 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 SH2D1AO60880 128 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM240Q5SV17 173 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 SHISA5Q8N114 240 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 LINC00479Q96M42 142 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 ZNRF1Q8ND25 227 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 SPANXDQ9BXN6 97 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 G3V4G9 280 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 TDRG1Q3Y452 100 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 UTF1Q5T230 341 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 LINC01587Q99440 93 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 TCRAP04437 139 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 Q6ZS52 159 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 ZNF329Q86UD4 541 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 IGKV1-9A0A0C4DH69 117 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 MALP21145 153 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 CD24P25063 80 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 RPL15P61313 204 aaKnown RBP4.67□□□□□ -1.66
CSMD1-215ENST00000537824 RASL10AQ92737 203 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 RNF125Q96EQ8 232 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM243Q9BU79 118 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 VDAC2P45880 294 aaPredicted RBP4.67□□□□□ -1.66
CSMD1-215ENST00000537824 FGFBP3Q8TAT2 258 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM14EPQ6UXP3 125 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 PAQR4Q8N4S7 273 aaPredicted RBP4.67□□□□□ -1.66
CSMD1-215ENST00000537824 DEFB125Q8N687 156 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 Q8TAT8 98 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 OSR1Q8TAX0 266 aaPredicted RBP4.67□□□□□ -1.66
CSMD1-215ENST00000537824 ZNF501Q96CX3 271 aaPredicted RBP4.67□□□□□ -1.66
CSMD1-215ENST00000537824 NTF4P34130 210 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 RNF183Q96D59 192 aa4.67□□□□□ -1.66
CSMD1-215ENST00000537824 IQCF6A8MYZ5 107 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 FGF6P10767 208 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 C5orf47Q569G3 176 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 C16orf97H3BN30 126 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 LYPD3O95274 346 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 LYZL4Q96KX0 146 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 VGLL1Q99990 258 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 PRO1854Q9UHT4 67 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 TREML4Q6UXN2 200 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 C8orf86Q6ZUL3 223 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 CTSBP07858 339 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 SIGLEC8Q9NYZ4 499 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 DUX4L9Q6RFH8 374 aaPredicted RBP4.66□□□□□ -1.66
CSMD1-215ENST00000537824 OR11H6Q8NGC7 330 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 COL4A1P02462 1669 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 IGHV1-24A0A0C4DH33 117 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 A0A0U1RQV1 116 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 C12orf74Q32Q52 190 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 IFI6P09912 130 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 IGLC1P0CG04 106 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 MRPL51Q4U2R6 128 aaKnown RBP4.66□□□□□ -1.66
CSMD1-215ENST00000537824 SUMO4Q6EEV6 95 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 TMEM54Q969K7 222 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 RPP25Q9BUL9 199 aaKnown RBP4.66□□□□□ -1.66
CSMD1-215ENST00000537824 IGHV5-10-1A0A0J9YXX1 117 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 FAM90A9PA6NNJ1 464 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 VCYO14598 125 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 VWC2Q2TAL6 325 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 CLUHP3Q96NS8 147 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 CYYR1Q96J86 154 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 DNAJC30Q96LL9 226 aa4.66□□□□□ -1.66
CSMD1-215ENST00000537824 TRAV40A0A0B4J280 105 aa4.65□□□□□ -1.66
CSMD1-215ENST00000537824 LINC00271P0C7V0 271 aa4.65□□□□□ -1.66
CSMD1-215ENST00000537824 PRCDQ00LT1 54 aa4.65□□□□□ -1.66
CSMD1-215ENST00000537824 KLK10O43240 276 aa4.65□□□□□ -1.66
CSMD1-215ENST00000537824 HLA-DMBP28068 263 aa4.65□□□□□ -1.66
CSMD1-215ENST00000537824 PCP2Q8IVA1 136 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms