RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 CHAC1Q9BUX1 264 aa12.42□□□□□ -0.42
CHFR-213ENST00000536843 FAM215AQ9Y5M1 114 aa12.42□□□□□ -0.42
CHFR-213ENST00000536843 TRBV6-1A0A0K0K1D8 114 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 KBTBD11-OT1A0A1B0GTJ5 212 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 ETDBQ3ZM63 59 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 VSTM5A8MXK1 200 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 SRRM5B3KS81 715 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 SHISA9B4DS77 424 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 IGLV2-11P01706 119 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 HOXB4P17483 251 aaPredicted RBP12.41□□□□□ -0.42
CHFR-213ENST00000536843 CFHR2P36980 270 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 Q6AWC8 147 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 SH2D6Q7Z4S9 175 aa12.41□□□□□ -0.42
CHFR-213ENST00000536843 ZCCHC24Q8N2G6 241 aaKnown RBP12.41□□□□□ -0.42
CHFR-213ENST00000536843 IGLL5B9A064 214 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 MOGAT3Q86VF5 341 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 SRSF12Q8WXF0 261 aaKnown RBP12.4□□□□□ -0.42
CHFR-213ENST00000536843 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 ZNF785A8K8V0 405 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 K7EM74 188 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 SPRY3O43610 288 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 IGFL3Q6UXB1 125 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 CEND1Q8N111 149 aa12.4□□□□□ -0.42
CHFR-213ENST00000536843 NHP2Q9NX24 153 aaKnown RBP12.4□□□□□ -0.42
CHFR-213ENST00000536843 LOC389332A0A1B0GUA5 103 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 D6R8Y8 96 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 ORM2P19652 201 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 SRSF1Q07955 248 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHFR-213ENST00000536843 C5orf64Q2M2E5 130 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 RITA1Q96K30 269 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 PRO0461Q9UI25 63 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 TNCP24821 2201 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 TRAV8-1A0A0A6YYK1 113 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 SLC25A17O43808 307 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 NDUFS7O75251 213 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 TSPAN13O95857 204 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 Q6ZS92 163 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 ZNRF1Q8ND25 227 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 ZNF418Q8TF45 676 aaPredicted RBP12.39□□□□□ -0.43
CHFR-213ENST00000536843 ZNF479Q96JC4 524 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 PRELID3AQ96N28 172 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 OTORQ9NRC9 128 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 MRPL36Q9P0J6 103 aaKnown RBP12.39□□□□□ -0.43
CHFR-213ENST00000536843 DKK2Q9UBU2 259 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 CADP27708 2225 aa12.39□□□□□ -0.43
CHFR-213ENST00000536843 hADV38S2A0JD32 116 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 ATP5G2Q06055 141 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 FAM201AQ5SY85 155 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 ZMAT4Q9H898 229 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 H3BMG7 143 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 PRNTQ86SH4 94 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 ORMDL3Q8N138 153 aa12.38□□□□□ -0.43
CHFR-213ENST00000536843 OSR1Q8TAX0 266 aaPredicted RBP12.38□□□□□ -0.43
CHFR-213ENST00000536843 GLRXP35754 106 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHFR-213ENST00000536843 WT1-ASQ06250 92 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 TRBV25-1A0A075B6N4 114 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 E7EUB6 86 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 FAM104BQ5XKR9 115 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 Q71RC1 249 aaPredicted RBP12.37□□□□□ -0.43
CHFR-213ENST00000536843 HHLA3Q9XRX5 114 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
CHFR-213ENST00000536843 IGHV3-48P01763 117 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 INSL3P51460 131 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 C22orf34Q6ZV56 151 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
CHFR-213ENST00000536843 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 LINC00312Q9Y6C7 94 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 DYSFO75923 2080 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 A6NJY4 79 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 H3BTX0 84 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 LHBP01229 141 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 FOXC1Q12948 553 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 C8orf86Q6ZUL3 223 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 RND1Q92730 232 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 TRGV9Q99603 122 aa12.36□□□□□ -0.43
CHFR-213ENST00000536843 CGB1A6NKQ9 187 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 FXYD7P58549 80 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 FAM27E3Q08E93 113 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 ZNF562Q6V9R5 426 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 GOLT1AQ6ZVE7 132 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 OR11H12B2RN74 326 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 C16orf97H3BN30 126 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 TAL2Q16559 108 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 DUX4L9Q6RFH8 374 aaPredicted RBP12.35□□□□□ -0.43
CHFR-213ENST00000536843 OR11H1Q8NG94 326 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 OR11H2Q8NH07 326 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 HARBI1Q96MB7 349 aa12.35□□□□□ -0.43
CHFR-213ENST00000536843 IGLV3-9A0A075B6K5 115 aa12.34□□□□□ -0.43
CHFR-213ENST00000536843 EVI2AP22794 236 aa12.34□□□□□ -0.43
CHFR-213ENST00000536843 ODF1Q14990 250 aa12.34□□□□□ -0.43
CHFR-213ENST00000536843 TTTY13Q9BZ97 58 aa12.34□□□□□ -0.43
CHFR-213ENST00000536843 CDIP1Q9H305 208 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms