RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SH2D7A6NKC9 451 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 RIGQ13278 110 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 PRR31Q5SQ13 230 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 FAM120AOSQ5T036 256 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 CCDC144NLQ6NUI1 221 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 TTC9CQ8N5M4 171 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 IGHV1-24A0A0C4DH33 117 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 LEPROTL1O95214 131 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 KIR3DL3Q8N743 410 aa12.6□□□□□ -0.39
CHMP1A-202ENST00000535997 TSPOP30536 169 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 KLRD1Q13241 179 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 Q6AWC8 147 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 CLEC5AQ9NY25 188 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 THYN1Q9P016 225 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 OOSP1A8MZH6 123 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 M0QZ24 198 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 IGLL1P15814 213 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 CRIP1P50238 77 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 CDSNQ15517 529 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 C11orf71Q6IPW1 123 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 Q71RC1 249 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 ARPC1AQ92747 370 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 RELNP78509 3460 aa12.59□□□□□ -0.39
CHMP1A-202ENST00000535997 SERTM2A0A1B0GWG4 89 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 SYS1-DBNDD2H3BUS1 97 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 ADORA2A-AS1P86434 159 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 MSRB2Q9Y3D2 182 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 M0R3E3 92 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 KLRB1Q12918 225 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 C21orf62Q9NYP8 219 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.4
CHMP1A-202ENST00000535997 NCBP2LA6PVI3 153 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 F8W735 103 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 CT45A10P0DMU9 189 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 CSN1S1P47710 185 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 PSG9Q00887 426 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 EBI3Q14213 229 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 S4R3C0 116 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 OR4C46A6NHA9 309 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 UCNP55089 124 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 FBLN7Q53RD9 439 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 VMO1Q7Z5L0 202 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 BCL6BQ8N143 479 aaPredicted RBP12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 Q8N6K4 173 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 STPG4Q8N801 248 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
CHMP1A-202ENST00000535997 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
CHMP1A-202ENST00000535997 A0A1W2PRD5 423 aa12.56□□□□□ -0.4
CHMP1A-202ENST00000535997 A0A1W2PRF3 423 aa12.56□□□□□ -0.4
CHMP1A-202ENST00000535997 A0A1W2PRM7 423 aa12.56□□□□□ -0.4
CHMP1A-202ENST00000535997 TFPI2P48307 235 aa12.56□□□□□ -0.4
CHMP1A-202ENST00000535997 MINOS1Q5TGZ0 78 aa12.56□□□□□ -0.4
CHMP1A-202ENST00000535997 MINOS1-NBL1R4GNA1 71 aa12.56□□□□□ -0.4
CHMP1A-202ENST00000535997 RPL7P18124 248 aaKnown RBP12.55□□□□□ -0.4
CHMP1A-202ENST00000535997 MAP1LC3CQ9BXW4 147 aa12.55□□□□□ -0.4
CHMP1A-202ENST00000535997 SCGB2A1O75556 95 aa12.55□□□□□ -0.4
CHMP1A-202ENST00000535997 COX8CQ7Z4L0 72 aa12.55□□□□□ -0.4
CHMP1A-202ENST00000535997 DYNAPQ8N1N2 210 aa12.55□□□□□ -0.4
CHMP1A-202ENST00000535997 ST20Q9HBF5 79 aa12.55□□□□□ -0.4
CHMP1A-202ENST00000535997 HSPB8Q9UJY1 196 aa12.55□□□□□ -0.4
CHMP1A-202ENST00000535997 FBLL1A6NHQ2 334 aaKnown RBP12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 ZNF138P52744 262 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 NDPQ00604 133 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 SAPCD1Q5SSQ6 148 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 PET117Q6UWS5 81 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 LINC00173Q6ZV60 143 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 ASCL2Q99929 193 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 NDUFB8O95169 186 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 CTSGP08311 255 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 TMUB1Q9BVT8 246 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 TMEM191AQ9H0A3 160 aa12.54□□□□□ -0.4
CHMP1A-202ENST00000535997 DTX2Q86UW9 622 aa12.53□□□□□ -0.4
CHMP1A-202ENST00000535997 C8orf49Q96NF6 230 aa12.53□□□□□ -0.4
CHMP1A-202ENST00000535997 AP5S1Q9NUS5 200 aa12.53□□□□□ -0.4
CHMP1A-202ENST00000535997 NPSP0C0P6 89 aa12.53□□□□□ -0.4
CHMP1A-202ENST00000535997 S100A7P31151 101 aa12.53□□□□□ -0.4
CHMP1A-202ENST00000535997 WNK2Q9Y3S1 2297 aa12.52□□□□□ -0.4
CHMP1A-202ENST00000535997 TMEM189A5PLL7 270 aa12.52□□□□□ -0.41
CHMP1A-202ENST00000535997 EGR2P11161 476 aaPredicted RBP12.52□□□□□ -0.41
CHMP1A-202ENST00000535997 TMEM11P17152 192 aa12.52□□□□□ -0.41
CHMP1A-202ENST00000535997 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 CSN3P07498 182 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 TPPP3Q9BW30 176 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 RABAC1Q9UI14 185 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 HRNRQ86YZ3 2850 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 IGHV7-81A0A0B4J1V7 117 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 FAM106CPP0CH98 169 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 HINT1P49773 126 aaPredicted RBP12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 PRSS3P2Q8NHM4 247 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 PRR25Q96S07 402 aa12.51□□□□□ -0.41
CHMP1A-202ENST00000535997 HSBP1L1C9JCN9 74 aa12.5□□□□□ -0.41
CHMP1A-202ENST00000535997 LYZL1Q6UWQ5 148 aa12.5□□□□□ -0.41
CHMP1A-202ENST00000535997 SH2D1AO60880 128 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms