RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ALKBH7Q9BT30 221 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-202ENST00000535906 CRYBG3Q68DQ2 2970 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 TMEM8BA6NDV4 472 aa10.46□□□□□ -0.73
VPS33B-202ENST00000535906 OR2T8A6NH00 312 aa10.46□□□□□ -0.73
VPS33B-202ENST00000535906 NPFFO15130 113 aa10.46□□□□□ -0.73
VPS33B-202ENST00000535906 MRPS12O15235 138 aaKnown RBP10.46□□□□□ -0.73
VPS33B-202ENST00000535906 CAMPP49913 170 aa10.46□□□□□ -0.73
VPS33B-202ENST00000535906 ZNF705AQ6ZN79 300 aaPredicted RBP10.46□□□□□ -0.73
VPS33B-202ENST00000535906 TCF24Q7RTU0 167 aa10.46□□□□□ -0.73
VPS33B-202ENST00000535906 MRPL52Q86TS9 123 aaKnown RBP10.46□□□□□ -0.73
VPS33B-202ENST00000535906 SSBP4Q9BWG4 385 aaPredicted RBP10.46□□□□□ -0.73
VPS33B-202ENST00000535906 THYN1Q9P016 225 aa10.46□□□□□ -0.73
VPS33B-202ENST00000535906 CELSR2Q9HCU4 2923 aa10.46□□□□□ -0.73
VPS33B-202ENST00000535906 UTP20O75691 2785 aaKnown RBP10.46□□□□□ -0.74
VPS33B-202ENST00000535906 PRB4P10163 310 aaPredicted RBP10.46□□□□□ -0.74
VPS33B-202ENST00000535906 DOPEY1Q5JWR5 2465 aa10.46□□□□□ -0.74
VPS33B-202ENST00000535906 FAM19A2Q8N3H0 131 aa10.46□□□□□ -0.74
VPS33B-202ENST00000535906 OR4F17Q8NGA8 305 aa10.46□□□□□ -0.74
VPS33B-202ENST00000535906 TMEM190Q8WZ59 177 aa10.46□□□□□ -0.74
VPS33B-202ENST00000535906 SPG11Q96JI7 2443 aa10.46□□□□□ -0.74
VPS33B-202ENST00000535906 GFRA4Q9GZZ7 299 aa10.46□□□□□ -0.74
VPS33B-202ENST00000535906 SOX21Q9Y651 276 aaPredicted RBP10.46□□□□□ -0.74
VPS33B-202ENST00000535906 IGLV2-11P01706 119 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 C3orf79P0CE67 100 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 HBBP68871 147 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 GOLT1AQ6ZVE7 132 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 Q71RC1 249 aaPredicted RBP10.45□□□□□ -0.74
VPS33B-202ENST00000535906 Q86TA4 180 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 GTSF1Q8WW33 167 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
VPS33B-202ENST00000535906 CCL19Q99731 98 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 TMUB1Q9BVT8 246 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 IGHV4-61A0A0C4DH41 118 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 SH2D7A6NKC9 451 aaPredicted RBP10.45□□□□□ -0.74
VPS33B-202ENST00000535906 NPIPB6E9PJ23 425 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 ATP6V0E1O15342 81 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 CTSGP08311 255 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 SIGLEC15Q6ZMC9 328 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 BORCS7Q96B45 105 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 RNF24Q9Y225 148 aa10.45□□□□□ -0.74
VPS33B-202ENST00000535906 IGHV3OR16-10A0A075B7F0 116 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 TRBV6-1A0A0K0K1D8 114 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 LINC01548A6NM66 108 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 NTF3P20783 257 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 PAX8Q06710 450 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 UNQ5815/PRO19632Q6UWF5 114 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 OR2D3Q8NGH3 330 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 ZNF414Q96IQ9 312 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 M0QZK8 103 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 HSBP1O75506 76 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 CTRLP40313 264 aa10.44□□□□□ -0.74
VPS33B-202ENST00000535906 RBPMS2Q6ZRY4 209 aaKnown RBP10.44□□□□□ -0.74
VPS33B-202ENST00000535906 PRNTQ86SH4 94 aa10.43□□□□□ -0.74
VPS33B-202ENST00000535906 CIARTQ8N365 385 aaPredicted RBP10.43□□□□□ -0.74
VPS33B-202ENST00000535906 PIMREGQ9BSJ6 248 aa10.43□□□□□ -0.74
VPS33B-202ENST00000535906 CSMD2Q7Z408 3487 aa10.43□□□□□ -0.74
VPS33B-202ENST00000535906 COL8A1P27658 744 aa10.43□□□□□ -0.74
VPS33B-202ENST00000535906 FAM110DQ8TAY7 271 aaPredicted RBP10.43□□□□□ -0.74
VPS33B-202ENST00000535906 C10orf105Q8TEF2 133 aa10.43□□□□□ -0.74
VPS33B-202ENST00000535906 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
VPS33B-202ENST00000535906 IGHV3-35A0A0C4DH35 117 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 G3V318 75 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 C15orf32Q32M92 178 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 LYPD1Q8N2G4 141 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 ASCL2Q99929 193 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 IGHV3OR16-8A0A075B7F1 116 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 M0R3E3 92 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 C16orf54Q6UWD8 224 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 BRD3OSQ6XYD6 125 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 TMEM219Q86XT9 240 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
VPS33B-202ENST00000535906 MYO18BQ8IUG5 2567 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 ZNF785A8K8V0 405 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 M0R2Z0 102 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 TCAPO15273 167 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 FAM162BQ5T6X4 162 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 RNASEKQ6P5S7 137 aaKnown RBP10.41□□□□□ -0.74
VPS33B-202ENST00000535906 C5orf56Q8N8D9 126 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 TXN2Q99757 166 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 FAM181BA6NEQ2 426 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 ATP5J2P56134 94 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 RHOGP84095 191 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 ZNF502Q8TBZ5 544 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 ZFP30Q9Y2G7 519 aa10.41□□□□□ -0.74
VPS33B-202ENST00000535906 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
VPS33B-202ENST00000535906 TRAV40A0A0B4J280 105 aa10.4□□□□□ -0.74
VPS33B-202ENST00000535906 IGHV1-69DA0A0B4J2H0 117 aa10.4□□□□□ -0.74
VPS33B-202ENST00000535906 IGHV1-69P01742 117 aa10.4□□□□□ -0.74
VPS33B-202ENST00000535906 GPR183P32249 361 aa10.4□□□□□ -0.74
VPS33B-202ENST00000535906 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
VPS33B-202ENST00000535906 PIFOQ8TCI5 191 aa10.4□□□□□ -0.74
VPS33B-202ENST00000535906 USP24Q9UPU5 2620 aa10.4□□□□□ -0.74
VPS33B-202ENST00000535906 ZFYVE26Q68DK2 2539 aa10.4□□□□□ -0.75
VPS33B-202ENST00000535906 K7EQM0 130 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 GOSR1O95249 250 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 PDE6HQ13956 83 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms