RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 SIGLEC8Q9NYZ4 499 aa8.2□□□□□ -1.1
UBE3B-205ENST00000535900 SMPXQ9UHP9 88 aa8.2□□□□□ -1.1
UBE3B-205ENST00000535900 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 A0A1B0GV50 99 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 F6UZH7 168 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 SRP19P09132 144 aaKnown RBP8.19□□□□□ -1.1
UBE3B-205ENST00000535900 SFTA3P0C7M3 94 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 HIST1H1EP10412 219 aaKnown RBP8.19□□□□□ -1.1
UBE3B-205ENST00000535900 KRTAP10-11P60412 298 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
UBE3B-205ENST00000535900 PDE6HQ13956 83 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 DEFB136Q30KP8 78 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 FAM74A3Q4VXF1 159 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 SPATA31B1PQ5VZV4 182 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 C16orf54Q6UWD8 224 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 SVBPQ8N300 66 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 OR9G4Q8NGQ1 327 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 PAXXQ9BUH6 204 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 MCRIP2Q9BUT9 160 aaKnown RBP8.19□□□□□ -1.1
UBE3B-205ENST00000535900 SLC25A2Q9BXI2 301 aa8.19□□□□□ -1.1
UBE3B-205ENST00000535900 A0A087X0K7 114 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 TMEM213A2RRL7 107 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 C2orf70A6NJV1 201 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 C9JQL5 133 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 F8W036 122 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 OVOL1O14753 267 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 HMGB3O15347 200 aaKnown RBP8.18□□□□□ -1.1
UBE3B-205ENST00000535900 ZNF253O75346 499 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 GP9P14770 177 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 SLURP1P55000 103 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 EGFEM1PQ0D2K5 195 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 SOHLH1Q5JUK2 328 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 LYPD1Q8N2G4 141 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 DLX4Q92988 240 aaPredicted RBP8.18□□□□□ -1.1
UBE3B-205ENST00000535900 ZNF503Q96F45 646 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 LINC00052Q96N35 136 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 RARRES2Q99969 163 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 RHPN1-AS1Q9BWJ2 59 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 TMPRSS5Q9H3S3 457 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
UBE3B-205ENST00000535900 FAM74A7A6NL05 159 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 C11orf94C9JXX5 98 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 CHEK1O14757 476 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 PAGE4O60829 102 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 NBEAP1P0C6P0 100 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 FOLR2P14207 255 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 ATF4P18848 351 aaPredicted RBP8.17□□□□□ -1.1
UBE3B-205ENST00000535900 CBLN1P23435 193 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 CD81P60033 236 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 UBE2L3P68036 154 aaKnown RBP8.17□□□□□ -1.1
UBE3B-205ENST00000535900 TM4SF20Q53R12 229 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 MORN5Q5VZ52 161 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 ARL6IP6Q8N6S5 226 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 RXFP4Q8TDU9 374 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 GLMPQ8WWB7 406 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 RPUSD4Q96CM3 377 aaKnown RBP8.17□□□□□ -1.1
UBE3B-205ENST00000535900 FXYD5Q96DB9 178 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
UBE3B-205ENST00000535900 IGHV3OR16-8A0A075B7F1 116 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 TRAV5A0A0B4J249 113 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 TRAV25A0A0B4J276 109 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 MRPS12O15235 138 aaKnown RBP8.16□□□□□ -1.1
UBE3B-205ENST00000535900 ZNF207O43670 478 aaKnown RBP8.16□□□□□ -1.1
UBE3B-205ENST00000535900 SNAPINO95295 136 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 IGLC2P0DOY2 106 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 PNRC1Q12796 327 aaPredicted RBP8.16□□□□□ -1.1
UBE3B-205ENST00000535900 SIGLEC15Q6ZMC9 328 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 CCDC28AQ8IWP9 274 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 DUX3Q96PT4 197 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 B9D2Q9BPU9 175 aa8.16□□□□□ -1.1
UBE3B-205ENST00000535900 ZMAT5Q9UDW3 170 aaKnown RBP8.16□□□□□ -1.1
UBE3B-205ENST00000535900 TRBV19A0A075B6N1 114 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 APOC3P02656 99 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 CSN3P07498 182 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 INSL3P51460 131 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 PSG9Q00887 426 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 CST9LP1Q5W188 147 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 LEMD1Q68G75 181 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 CYB561D1Q8N8Q1 229 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 OR2K2Q8NGT1 345 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 SLC50A1Q9BRV3 221 aa8.15□□□□□ -1.1
UBE3B-205ENST00000535900 ZNF785A8K8V0 405 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 APOHP02749 345 aaPredicted RBP8.14□□□□□ -1.11
UBE3B-205ENST00000535900 OR10J4P0C629 311 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 PYYP10082 97 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 PAFAH1B2P68402 229 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 FAM90A2PQ658T7 463 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 HIST1H2BAQ96A08 127 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 NIPSNAP3BQ9BS92 247 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 NRN1Q9NPD7 142 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 PRELID1Q9Y255 219 aa8.14□□□□□ -1.11
UBE3B-205ENST00000535900 YTHDF2Q9Y5A9 579 aaKnown RBP8.14□□□□□ -1.11
UBE3B-205ENST00000535900 KMT2CQ8NEZ4 4911 aaKnown RBP8.13□□□□□ -1.11
UBE3B-205ENST00000535900 B4DEV8 164 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms