RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 PXMP4Q9Y6I8 212 aa11.94□□□□□ -0.5
ATL3-202ENST00000535789 VPS13DQ5THJ4 4388 aa11.93□□□□□ -0.5
ATL3-202ENST00000535789 KMT2AQ03164 3969 aa11.93□□□□□ -0.5
ATL3-202ENST00000535789 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
ATL3-202ENST00000535789 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
ATL3-202ENST00000535789 KCNIP2Q9NS61 270 aa11.93□□□□□ -0.5
ATL3-202ENST00000535789 SLC39A9Q9NUM3 307 aa11.93□□□□□ -0.5
ATL3-202ENST00000535789 EPPK1P58107 5090 aaKnown RBP11.92□□□□□ -0.5
ATL3-202ENST00000535789 B2MP61769 119 aa11.92□□□□□ -0.5
ATL3-202ENST00000535789 SERF2P84101 59 aa11.92□□□□□ -0.5
ATL3-202ENST00000535789 PMS2P11Q13670 270 aa11.92□□□□□ -0.5
ATL3-202ENST00000535789 FFAR4Q5NUL3 377 aa11.92□□□□□ -0.5
ATL3-202ENST00000535789 OR11H2Q8NH07 326 aa11.92□□□□□ -0.5
ATL3-202ENST00000535789 FABP1P07148 127 aa11.91□□□□□ -0.5
ATL3-202ENST00000535789 C1orf194Q5T5A4 169 aa11.91□□□□□ -0.5
ATL3-202ENST00000535789 EIF5AL1Q6IS14 154 aaKnown RBP11.91□□□□□ -0.5
ATL3-202ENST00000535789 Q8NAQ8 132 aa11.91□□□□□ -0.5
ATL3-202ENST00000535789 CSNK1G2-AS1Q8NCQ2 148 aa11.91□□□□□ -0.5
ATL3-202ENST00000535789 ZNF680Q8NEM1 530 aa11.91□□□□□ -0.5
ATL3-202ENST00000535789 RARRES2Q99969 163 aa11.91□□□□□ -0.5
ATL3-202ENST00000535789 SCRT1Q9BWW7 348 aa11.91□□□□□ -0.5
ATL3-202ENST00000535789 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
ATL3-202ENST00000535789 ZNF98A6NK75 572 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 H3BMM0 161 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 H3BRN7 92 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 DEFB4AO15263 64 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.5
ATL3-202ENST00000535789 PLP1P60201 277 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 RAB2AP61019 212 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 GCSAMLQ5JQS6 135 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 FAM74A1Q5RGS3 127 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 C20orf173Q96LM9 149 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 C11orf68Q9H3H3 251 aaKnown RBP11.9□□□□□ -0.5
ATL3-202ENST00000535789 CLEC5AQ9NY25 188 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 DOK5Q9P104 306 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 X6R8D5 127 aa11.9□□□□□ -0.5
ATL3-202ENST00000535789 HLA-DRB4P13762 266 aa11.89□□□□□ -0.51
ATL3-202ENST00000535789 ORM2P19652 201 aa11.89□□□□□ -0.51
ATL3-202ENST00000535789 SULT1A2P50226 295 aa11.89□□□□□ -0.51
ATL3-202ENST00000535789 TMEM41BQ5BJD5 291 aa11.89□□□□□ -0.51
ATL3-202ENST00000535789 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.89□□□□□ -0.51
ATL3-202ENST00000535789 SLC25A22Q9H936 323 aa11.89□□□□□ -0.51
ATL3-202ENST00000535789 HLA-DRB4X5D2U9 266 aa11.89□□□□□ -0.51
ATL3-202ENST00000535789 UMAD1C9J7I0 102 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 IFNA7P01567 189 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 M6PRP20645 277 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 PSMB3P49720 205 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
ATL3-202ENST00000535789 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
ATL3-202ENST00000535789 AKR1C8PQ5T2L2 129 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 PXDC1Q5TGL8 231 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
ATL3-202ENST00000535789 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 OR8I2Q8N0Y5 310 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 OR1B1Q8NGR6 318 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 RPRMQ9NS64 109 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 DNAH6Q9C0G6 4158 aa11.88□□□□□ -0.51
ATL3-202ENST00000535789 ZNF705EA8MWA4 302 aaPredicted RBP11.87□□□□□ -0.51
ATL3-202ENST00000535789 F6UB75 175 aa11.87□□□□□ -0.51
ATL3-202ENST00000535789 RGS13O14921 159 aa11.87□□□□□ -0.51
ATL3-202ENST00000535789 MBP02144 154 aa11.87□□□□□ -0.51
ATL3-202ENST00000535789 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
ATL3-202ENST00000535789 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
ATL3-202ENST00000535789 RBMY1FQ15415 496 aaKnown RBP11.87□□□□□ -0.51
ATL3-202ENST00000535789 Q6ZRG5 221 aa11.87□□□□□ -0.51
ATL3-202ENST00000535789 ZNF767PQ75MW2 155 aa11.87□□□□□ -0.51
ATL3-202ENST00000535789 RPP25LQ8N5L8 163 aaKnown RBP11.87□□□□□ -0.51
ATL3-202ENST00000535789 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
ATL3-202ENST00000535789 SLC25A39Q9BZJ4 359 aaPredicted RBP11.87□□□□□ -0.51
ATL3-202ENST00000535789 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
ATL3-202ENST00000535789 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 IGHV4-28A0A0C4DH34 117 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 CXorf65A6NEN9 183 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 OR5G3P0C626 314 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 FHITP49789 147 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 RAB5CP51148 216 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 NANOS2P60321 138 aaKnown RBP11.86□□□□□ -0.51
ATL3-202ENST00000535789 ZNF726P1Q15940 193 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 OR10G4Q8NGN3 311 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 OR10G9Q8NGN4 311 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 OR10G7Q8NGN6 311 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 SHANK2-AS3Q9BTD1 123 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 FRAS1Q86XX4 4008 aa11.86□□□□□ -0.51
ATL3-202ENST00000535789 ISLRO14498 428 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 MRPS12O15235 138 aaKnown RBP11.85□□□□□ -0.51
ATL3-202ENST00000535789 COX7A2P2O60397 106 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 HYPMO75409 117 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 SPATA31B1PQ5VZV4 182 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 IGFL4Q6B9Z1 124 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 DPPA3Q6W0C5 159 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 RNF141Q8WVD5 230 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 LINC00052Q96N35 136 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 PFDN5Q99471 154 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 XCL2Q9UBD3 114 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 PFDN2Q9UHV9 154 aa11.85□□□□□ -0.51
ATL3-202ENST00000535789 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms