RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 COQ2Q96H96 371 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 SLC25A2Q9BXI2 301 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 TTTY12Q9BZ98 90 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 MAP6D1Q9H9H5 199 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 SPANXA1Q9NS26 97 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 HIGD1BQ9P298 99 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 ARHGAP21Q5T5U3 1957 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 ATMQ13315 3056 aa5.25□□□□□ -1.57
USP28-202ENST00000535607 BOD1L1Q8NFC6 3051 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 IGHV3-43A0A0B4J1X8 118 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 TCRBV4S1A1TA0A5B7 111 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 DEFB108AA8MXU0 73 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 H0Y8G0 127 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 C15orf65H3BRN8 121 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 SAP30O75446 220 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 CA1P00915 261 aaPredicted RBP5.24□□□□□ -1.57
USP28-202ENST00000535607 APOHP02749 345 aaPredicted RBP5.24□□□□□ -1.57
USP28-202ENST00000535607 IGHV3-43DP0DP04 118 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 AZU1P20160 251 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 GATA2P23769 480 aaPredicted RBP5.24□□□□□ -1.57
USP28-202ENST00000535607 MPV17P39210 176 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 UQCRFS1P47985 274 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 FOXA3P55318 350 aaPredicted RBP5.24□□□□□ -1.57
USP28-202ENST00000535607 SRYQ05066 204 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 SRSF1Q07955 248 aaKnown RBP eCLIP5.24□□□□□ -1.57
USP28-202ENST00000535607 GUSBP1Q15486 140 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 TAL2Q16559 108 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 GDF5OSQ5U4N7 250 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 LYRM7Q5U5X0 104 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 PRSS57Q6UWY2 283 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 ZNF841Q6ZN19 808 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 C1orf122Q6ZSJ8 110 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 WDR86Q86TI4 376 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 OR13A1Q8NGR1 328 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 OR9G1Q8NH87 305 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 LRRC29Q8WV35 223 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 PGLYRP4Q96LB8 373 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 ZNF48Q96MX3 618 aaPredicted RBP5.24□□□□□ -1.57
USP28-202ENST00000535607 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 FAM234AQ9H0X4 552 aa5.24□□□□□ -1.57
USP28-202ENST00000535607 MGAQ8IWI9 3026 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 CHD8Q9HCK8 2581 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 PTPRQQ9UMZ3 2332 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 PPIAL4CA0A0B4J2A2 164 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 C19orf71A6NCJ1 209 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 PGPA6NDG6 321 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 DNAJC9-AS1A6NH13 148 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 GNG7O60262 68 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 LTAP01374 205 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 IGHG3P01860 377 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 HBDP02042 147 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 PPIAL4GP0DN37 164 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 HLA-DRB4P13762 266 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 CKS1BP61024 79 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 SSBP2P81877 361 aaPredicted RBP5.23□□□□□ -1.57
USP28-202ENST00000535607 EDDM3AQ14507 147 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 PLGLAQ15195 96 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 WDR82Q6UXN9 313 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 C2orf91Q6ZV80 131 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 BHLHA15Q7RTS1 189 aaPredicted RBP5.23□□□□□ -1.57
USP28-202ENST00000535607 THAP8Q8NA92 274 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 RFESDQ8TAC1 157 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 ZNF502Q8TBZ5 544 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 NTN5Q8WTR8 489 aaPredicted RBP5.23□□□□□ -1.57
USP28-202ENST00000535607 MRAP2Q96G30 205 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 ZNF414Q96IQ9 312 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 FAM167A-AS1Q96KT0 104 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 PRORYQ9H606 182 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 OTORQ9NRC9 128 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 CALYQ9NYX4 217 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 ZNF835Q9Y2P0 537 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 HLA-DRB4X5D2U9 266 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 ITPR1Q14643 2758 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 BSNQ9UPA5 3926 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 GTF3C1Q12789 2109 aa5.23□□□□□ -1.57
USP28-202ENST00000535607 MED13Q9UHV7 2174 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 SERTM2A0A1B0GWG4 89 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 RNASE2P10153 161 aaKnown RBP5.22□□□□□ -1.57
USP28-202ENST00000535607 CFHR2P36980 270 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 MAGEA5P43359 124 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 CEBPDP49716 269 aaPredicted RBP5.22□□□□□ -1.57
USP28-202ENST00000535607 TCTAP57738 103 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 FAM27E3Q08E93 113 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 LTC4SQ16873 150 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 RPL39P5Q59GN2 51 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 FOXI2Q6ZQN5 318 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 LINC00305Q7Z4B0 112 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 VKORC1L1Q8N0U8 176 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 KIR3DL3Q8N743 410 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 OR8A1Q8NGG7 326 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 KLF14Q8TD94 323 aaPredicted RBP5.22□□□□□ -1.57
USP28-202ENST00000535607 FXYD5Q96DB9 178 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 URB1-AS1Q96HZ7 61 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 VGLL1Q99990 258 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 HES7Q9BYE0 225 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 HIF1ANQ9NWT6 349 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 THYN1Q9P016 225 aa5.22□□□□□ -1.57
USP28-202ENST00000535607 DSPP15924 2871 aaKnown RBP5.22□□□□□ -1.57
USP28-202ENST00000535607 SPENQ96T58 3664 aaKnown RBP5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms