RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 UHRF2Q96PU4 802 aa7.13□□□□□ -1.27
CLSTN3-203ENST00000534830 LOC102723971A0A1B0GUV8 181 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 LYRM1O43325 122 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 TCRBP04435 133 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 PRM2P04554 102 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 EMP1P54849 157 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 SLC38A11Q08AI6 406 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 SPINK13Q1W4C9 94 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 PXDC1Q5TGL8 231 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 ARL6Q9H0F7 186 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 C20orf85Q9H1P6 137 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 ARV1Q9H2C2 271 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 GSKIPQ9P0R6 139 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 YTHDF2Q9Y5A9 579 aaKnown RBP7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 LRP1BQ9NZR2 4599 aa7.12□□□□□ -1.27
CLSTN3-203ENST00000534830 M0R2Z0 102 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 AGPAT2O15120 278 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 SCGB1D2O95969 90 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 OR5G3P0C626 314 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 CXCL2P19875 107 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 TSPOP30536 169 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 B2MP61769 119 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 FGL1Q08830 312 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 IL15RAQ13261 267 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 PSG3Q16557 428 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 OR8A1Q8NGG7 326 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 TMEM37Q8WXS4 190 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 MGST2Q99735 147 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 NDUFA13Q9P0J0 144 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 MGAT4CQ9UBM8 478 aa7.11□□□□□ -1.27
CLSTN3-203ENST00000534830 ZNF705GA8MUZ8 300 aaPredicted RBP7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 BOLA2-SMG1P6H3BVE0 249 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 CCSO14618 274 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 INSP01308 110 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 MORN5Q5VZ52 161 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 LINC00305Q7Z4B0 112 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 S100A7AQ86SG5 101 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 ZNF546Q86UE3 836 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 BAP18Q8IXM2 172 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 ZNF738Q8NE65 137 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 ZNF431Q8TF32 576 aaPredicted RBP7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 ZNF331Q9NQX6 463 aaPredicted RBP7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 RNF24Q9Y225 148 aa7.1□□□□□ -1.27
CLSTN3-203ENST00000534830 TRAV12-2A0A075B6T6 113 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 LYRM9A8MSI8 78 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 GOSR2O14653 212 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 AZU1P20160 251 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 DAD1P61803 113 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 C1orf134Q5TEV5 83 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 Q6ZR54 194 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 UBE2DNLQ8IWF7 75 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 SAT2Q96F10 170 aaPredicted RBP7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 SEC22CQ9BRL7 303 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 CCDC32Q9BV29 185 aa7.09□□□□□ -1.27
CLSTN3-203ENST00000534830 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 FAM24AA6NFZ4 105 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 IGLC2P0DOY2 106 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 HIST1H1AQ02539 215 aaPredicted RBP7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 OPCMLQ14982 345 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 RNF212Q495C1 297 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 TMEM88Q6PEY1 159 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 LCN15Q6UWW0 184 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 LINC00299Q6ZSB3 139 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 BPIFA4PQ86YQ2 179 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 TMEM256Q8N2U0 113 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 C12orf45Q8N5I9 185 aaPredicted RBP7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 CHAC2Q8WUX2 184 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 RPUSD4Q96CM3 377 aaKnown RBP7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 C2orf50Q96LR7 162 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 SLC50A1Q9BRV3 221 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 TMEM208Q9BTX3 173 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 DNAJC4Q9NNZ3 241 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 NUDT15Q9NV35 164 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 WDR83OSQ9Y284 106 aa7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 APOBP04114 4563 aaKnown RBP7.08□□□□□ -1.28
CLSTN3-203ENST00000534830 C5orf51A6NDU8 294 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 L7N2F9 121 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 SLC17A3O00476 420 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 H2AFB2P0C5Z0 115 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 PRB4P10163 310 aaPredicted RBP7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 CDKN1BP46527 198 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 TAS2R60P59551 318 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 VAMP2P63027 116 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 TNP2Q05952 138 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 ZNF846Q147U1 533 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 KIR3DS1Q14943 382 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 C10orf113Q5VZT2 155 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 MIC13Q5XKP0 118 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 NRARPQ7Z6K4 114 aa7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 LSM5Q9Y4Y9 91 aaKnown RBP7.07□□□□□ -1.28
CLSTN3-203ENST00000534830 FAM25EA8MYX2 175 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 PRAC2D3DTV9 90 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 H3BQ15 152 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 COX7A2P2O60397 106 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 CST7O76096 145 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 SNRPCP09234 159 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms