RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 CSNK1G2-AS1Q8NCQ2 148 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 ARV1Q9H2C2 271 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 SLC25A22Q9H936 323 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
USF1-211ENST00000534633 HERC2O95714 4834 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 MPDU1O75352 247 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 B2MP61769 119 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 RAB31Q13636 194 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 PXDC1Q5TGL8 231 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 LINC00336Q6ZUF6 198 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 OR8I2Q8N0Y5 310 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 OR11H4Q8NGC9 324 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 PPP1R14BQ96C90 147 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 DNAJC4Q9NNZ3 241 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 NRN1Q9NPD7 142 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 TNFSF18Q9UNG2 199 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
USF1-211ENST00000534633 TRAV5A0A0B4J249 113 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 NUP62P37198 522 aaPredicted RBP9.04□□□□□ -0.96
USF1-211ENST00000534633 NUTF2P61970 127 aaKnown RBP9.04□□□□□ -0.96
USF1-211ENST00000534633 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 ST6GAL2Q96JF0 529 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 RSG1Q9BU20 258 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 C1QTNF4Q9BXJ3 329 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 CLEC5AQ9NY25 188 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 PFDN2Q9UHV9 154 aa9.04□□□□□ -0.96
USF1-211ENST00000534633 FXYD6-FXYD2A0A087WZ82 144 aa9.03□□□□□ -0.96
USF1-211ENST00000534633 COX7A2P2O60397 106 aa9.03□□□□□ -0.96
USF1-211ENST00000534633 AMBPP02760 352 aa9.03□□□□□ -0.96
USF1-211ENST00000534633 C10orf113Q5VZT2 155 aa9.03□□□□□ -0.96
USF1-211ENST00000534633 Q6ZRG5 221 aa9.03□□□□□ -0.96
USF1-211ENST00000534633 PARD6GQ9BYG4 376 aaPredicted RBP9.03□□□□□ -0.96
USF1-211ENST00000534633 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
USF1-211ENST00000534633 CELA1Q9UNI1 258 aa9.03□□□□□ -0.96
USF1-211ENST00000534633 DEFB131BA0A096LNP1 70 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 TRAV8-2A0A0B4J237 113 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 P0DMU3 169 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 FAM231AP0DMU4 169 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 FAM231CP0DMU5 169 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 DEFB1P60022 68 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 SNRPD3P62318 126 aaKnown RBP9.02□□□□□ -0.97
USF1-211ENST00000534633 SPATA31B1PQ5VZV4 182 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 C20orf173Q96LM9 149 aa9.02□□□□□ -0.97
USF1-211ENST00000534633 H3BQ15 152 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 IFNA5P01569 189 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 SNRPCP09234 159 aaKnown RBP9.01□□□□□ -0.97
USF1-211ENST00000534633 GALR1P47211 349 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 C12orf74Q32Q52 190 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 IGFL4Q6B9Z1 124 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 INO80EQ8NBZ0 244 aaPredicted RBP9.01□□□□□ -0.97
USF1-211ENST00000534633 OR1L4Q8NGR5 311 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 GPR82Q96P67 336 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 CYTL1Q9NRR1 136 aa9.01□□□□□ -0.97
USF1-211ENST00000534633 A0A087X0K7 114 aa9□□□□□ -0.97
USF1-211ENST00000534633 A0A1B0GVY2 172 aa9□□□□□ -0.97
USF1-211ENST00000534633 H3BMM0 161 aa9□□□□□ -0.97
USF1-211ENST00000534633 ARPC5O15511 151 aa9□□□□□ -0.97
USF1-211ENST00000534633 IGLC2P0DOY2 106 aa9□□□□□ -0.97
USF1-211ENST00000534633 RPL7P18124 248 aaKnown RBP9□□□□□ -0.97
USF1-211ENST00000534633 GDF5OSQ5U4N7 250 aa9□□□□□ -0.97
USF1-211ENST00000534633 RPL7L1Q6DKI1 246 aaKnown RBP9□□□□□ -0.97
USF1-211ENST00000534633 ZNF767PQ75MW2 155 aa9□□□□□ -0.97
USF1-211ENST00000534633 MIR17HGQ75NE6 70 aa9□□□□□ -0.97
USF1-211ENST00000534633 POM121L12Q8N7R1 296 aa9□□□□□ -0.97
USF1-211ENST00000534633 SCGB1C1Q8TD33 95 aa9□□□□□ -0.97
USF1-211ENST00000534633 FAM167A-AS1Q96KT0 104 aa9□□□□□ -0.97
USF1-211ENST00000534633 PFDN5Q99471 154 aa9□□□□□ -0.97
USF1-211ENST00000534633 NDUFAF3Q9BU61 184 aa9□□□□□ -0.97
USF1-211ENST00000534633 XCL2Q9UBD3 114 aa9□□□□□ -0.97
USF1-211ENST00000534633 PKHD1P08F94 4074 aa9□□□□□ -0.97
USF1-211ENST00000534633 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 C17orf112F2Z3M2 114 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 ISLRO14498 428 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 CXCL2P19875 107 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 S100A7P31151 101 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 PSMB3P49720 205 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 FAM78BQ5VT40 261 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 ZNF709Q8N972 641 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 SAT2Q96F10 170 aaPredicted RBP8.99□□□□□ -0.97
USF1-211ENST00000534633 ZNF503Q96F45 646 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 NEU1Q99519 415 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 SLC25A2Q9BXI2 301 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 MUC4Q99102 2169 aa8.99□□□□□ -0.97
USF1-211ENST00000534633 hCG_2014768A0A024R1R8 64 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 TMEM189A5PLL7 270 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 H3BTX0 84 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 EIF3GO75821 320 aaKnown RBP eCLIP8.98□□□□□ -0.97
USF1-211ENST00000534633 ATP6V0CP27449 155 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 CD300CQ08708 224 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 FFAR4Q5NUL3 377 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 ZNF705AQ6ZN79 300 aaPredicted RBP8.98□□□□□ -0.97
USF1-211ENST00000534633 S100A7AQ86SG5 101 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 BPIFA4PQ86YQ2 179 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 RNF182Q8N6D2 247 aa8.98□□□□□ -0.97
USF1-211ENST00000534633 HSD17B11Q8NBQ5 300 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms