RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 PRDM13Q9H4Q3 707 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 SERTAD4Q9NUC0 356 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 CLEC5AQ9NY25 188 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 VPREB3Q9UKI3 123 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 SOX21Q9Y651 276 aaPredicted RBP10.37□□□□□ -0.75
BEST1-208ENST00000534553 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 NAV2Q8IVL1 2488 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.37□□□□□ -0.75
BEST1-208ENST00000534553 DIRC3C9JPN6 131 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 NDUFA4O00483 81 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 ARL3P36405 182 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 CDX1P47902 265 aaPredicted RBP10.37□□□□□ -0.75
BEST1-208ENST00000534553 RPL15P61313 204 aaKnown RBP10.37□□□□□ -0.75
BEST1-208ENST00000534553 BLCAPP62952 87 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 CFHR3Q02985 330 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 Q6YL49 198 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 SLC50A1Q9BRV3 221 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 TRAPPC1Q9Y5R8 145 aa10.37□□□□□ -0.75
BEST1-208ENST00000534553 UTP20O75691 2785 aaKnown RBP10.36□□□□□ -0.75
BEST1-208ENST00000534553 IGHV4-59P01825 116 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 NDUFA6P56556 154 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 PSG3Q16557 428 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 KRTAP1-3Q8IUG1 177 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 NHLRC2Q8NBF2 726 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 NUDT10Q8NFP7 164 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 OR4B1Q8NGF8 309 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
BEST1-208ENST00000534553 NUDT11Q96G61 164 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 GNB1LQ9BYB4 327 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 LINC00527Q9UJ94 153 aa10.36□□□□□ -0.75
BEST1-208ENST00000534553 FAM231BA6NCW3 169 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 COA6Q5JTJ3 125 aaKnown RBP10.35□□□□□ -0.75
BEST1-208ENST00000534553 BCL6BQ8N143 479 aaPredicted RBP10.35□□□□□ -0.75
BEST1-208ENST00000534553 MAPK1IP1LQ8NDC0 245 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 TSKUQ8WUA8 353 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 C17orf77Q96MU5 243 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 NAT8BQ9UHF3 227 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 PRRC2AP48634 2157 aaKnown RBP10.35□□□□□ -0.75
BEST1-208ENST00000534553 CLPSL1A2RUU4 121 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 IZUMO1RA6ND01 250 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 A8MWL6 223 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 IGLV2-11P01706 119 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 P01737 135 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 IGHG4P01861 327 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 PF4V1P10720 104 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 PRR27Q6MZM9 219 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 NOL4LQ96MY1 436 aaPredicted RBP10.35□□□□□ -0.75
BEST1-208ENST00000534553 PRSS22Q9GZN4 317 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 RPP21Q9H633 154 aaKnown RBP10.35□□□□□ -0.75
BEST1-208ENST00000534553 ZNF331Q9NQX6 463 aaPredicted RBP10.35□□□□□ -0.75
BEST1-208ENST00000534553 U3KQE9 123 aa10.35□□□□□ -0.75
BEST1-208ENST00000534553 C19orf71A6NCJ1 209 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 NPIPB6E9PJ23 425 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 SAPCD1Q5SSQ6 148 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 ATP5L2Q7Z4Y8 100 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 PRNTQ86SH4 94 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 NPFFR1Q9GZQ6 430 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 PSG8Q9UQ74 426 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 CELSR2Q9HCU4 2923 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 CSMD2Q7Z408 3487 aa10.34□□□□□ -0.75
BEST1-208ENST00000534553 IGHV3-35A0A0C4DH35 117 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 A0A1W2PS18 150 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 MRPL53Q96EL3 112 aaKnown RBP10.33□□□□□ -0.76
BEST1-208ENST00000534553 SMAD5-AS1Q9Y6J3 95 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 HLA-DQA1P01909 254 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 SMIM6P0DI80 62 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 CT45A10P0DMU9 189 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 SLC35B1P78383 322 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 COX8CQ7Z4L0 72 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 GBGT1Q8N5D6 347 aa10.33□□□□□ -0.76
BEST1-208ENST00000534553 WIPF2Q8TF74 440 aaPredicted RBP10.33□□□□□ -0.76
BEST1-208ENST00000534553 CSMD1Q96PZ7 3565 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 RBAKDNA6NC62 111 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 PSMB8P28062 276 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 S100A2P29034 98 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 CIARTQ8N365 385 aaPredicted RBP10.32□□□□□ -0.76
BEST1-208ENST00000534553 TMEM86BQ8N661 226 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 OR4X2Q8NGF9 303 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
BEST1-208ENST00000534553 CREBBPQ92793 2442 aa10.31□□□□□ -0.76
BEST1-208ENST00000534553 XKRY2A2RUG3 117 aa10.31□□□□□ -0.76
BEST1-208ENST00000534553 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
BEST1-208ENST00000534553 M0R3E3 92 aa10.31□□□□□ -0.76
BEST1-208ENST00000534553 CR1P17927 2039 aa10.31□□□□□ -0.76
BEST1-208ENST00000534553 CHEK1O14757 476 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 C16orf54Q6UWD8 224 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 Q6ZS46 218 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 NEU1Q99519 415 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 FOXC2Q99958 501 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 NDFIP1Q9BT67 221 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 MRPL18Q9H0U6 180 aaKnown RBP10.3□□□□□ -0.76
BEST1-208ENST00000534553 POLQO75417 2590 aa10.3□□□□□ -0.76
BEST1-208ENST00000534553 CENPEQ02224 2701 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms