RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 HMGN1P05114 100 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 M6PRP20645 277 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 PPP1CCP36873 323 aaKnown RBP3.15□□□□□ -1.91
CASP4-213ENST00000534356 DAPP51397 102 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 PAFAH1B2P68402 229 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 RPL39P5Q59GN2 51 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 LYG2Q86SG7 212 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 DEFB107AQ8IZN7 70 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 SLC35G3Q8N808 338 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 OR10W1Q8NGF6 305 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 ASB17Q8WXJ9 295 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 SCGB3A2Q96PL1 93 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 CHCHD7Q9BUK0 85 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 C9orf16Q9BUW7 83 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 GLS2Q9UI32 602 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 GNG8Q9UK08 70 aa3.15□□□□□ -1.91
CASP4-213ENST00000534356 DNAH5Q8TE73 4624 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 UBR4Q5T4S7 5183 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 FUOMA2VDF0 154 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 PPP5D1E7EU14 171 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 M0R2N4 97 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 HBZP02008 142 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 POLR2GP62487 172 aaKnown RBP eCLIP3.14□□□□□ -1.91
CASP4-213ENST00000534356 KISS1Q15726 138 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 DEFB135Q30KP9 77 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 DEFB114Q30KQ6 69 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 MORN2Q502X0 79 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 ACTBL2Q562R1 376 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 SYT6Q5T7P8 510 aaPredicted RBP3.14□□□□□ -1.91
CASP4-213ENST00000534356 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 FAM131AQ6UXB0 335 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 SLC51BQ86UW2 128 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 Q8IYB0 196 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 GRPEL2Q8TAA5 225 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 ZNF251Q9BRH9 671 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 C6orf62Q9GZU0 229 aaPredicted RBP3.14□□□□□ -1.91
CASP4-213ENST00000534356 SPACA1Q9HBV2 294 aa3.14□□□□□ -1.91
CASP4-213ENST00000534356 OR4C45A6NMZ5 311 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 H0Y980 276 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 K7EN84 100 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 CCDC22O60826 627 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 SC5DO75845 299 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 OR7C1O76099 320 aaPredicted RBP3.13□□□□□ -1.91
CASP4-213ENST00000534356 NDUFA3O95167 84 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 CA2P00918 260 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 GLAP06280 429 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 SAA2P0DJI9 122 aaPredicted RBP3.13□□□□□ -1.91
CASP4-213ENST00000534356 HTR2CP28335 458 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 HTR2BP41595 481 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 ZNF137PP52743 207 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 C12orf73Q69YU5 71 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 ZNF660Q6AZW8 331 aaPredicted RBP3.13□□□□□ -1.91
CASP4-213ENST00000534356 ELP2Q6IA86 826 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 RXFP4Q8TDU9 374 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 TNFAIP8L1Q8WVP5 186 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 CANT1Q8WVQ1 401 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 TMEM106AQ96A25 262 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 ABHD14BQ96IU4 210 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 KCNS1Q96KK3 526 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 TSC22D3Q99576 134 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 PDCD1LG2Q9BQ51 273 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 VCX3AQ9NNX9 186 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 TAS2R4Q9NYW5 299 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 APLNQ9ULZ1 77 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 KLK5Q9Y337 293 aaPredicted RBP3.13□□□□□ -1.91
CASP4-213ENST00000534356 MYCBP2O75592 4640 aa3.13□□□□□ -1.91
CASP4-213ENST00000534356 FLG2Q5D862 2391 aaPredicted RBP3.12□□□□□ -1.91
CASP4-213ENST00000534356 TMEM30CPA0ZSE6 113 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 NUPR2A6NF83 97 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 C2orf70A6NJV1 201 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 ANKRD65E5RJM6 399 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 J3QLW9 94 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 AIPO00170 330 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 GATCO43716 136 aaKnown RBP3.12□□□□□ -1.91
CASP4-213ENST00000534356 PFDN1O60925 122 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 FADS2O95864 444 aaKnown RBP3.12□□□□□ -1.91
CASP4-213ENST00000534356 IGKV1-16P04430 117 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 IGKV4-1P06312 121 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 GZMHP20718 246 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 MYL9P24844 172 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 CMC4P56277 68 aaPredicted RBP3.12□□□□□ -1.91
CASP4-213ENST00000534356 RBM11P57052 281 aaKnown RBP3.12□□□□□ -1.91
CASP4-213ENST00000534356 FXYD3Q14802 87 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 RSU1Q15404 277 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 AKIRIN2Q53H80 203 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 NXNL2Q5VZ03 156 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 XAF1Q6GPH4 301 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 FAHD1Q6P587 224 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 ZNF833PQ6ZTB9 187 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 DHFR2Q86XF0 187 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 SYS1Q8N2H4 156 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 Q8N402 240 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 UBAC2Q8NBM4 344 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 OR52N1Q8NH53 320 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 PP6455Q8WZ26 134 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 CMTM5Q96DZ9 223 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 MRPS24Q96EL2 167 aaKnown RBP3.12□□□□□ -1.91
CASP4-213ENST00000534356 CIB1Q99828 191 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms