RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 C9JCJ5 164 aa13.99□□□□□ -0.17
PHRF1-206ENST00000534320 ADCYAP1P18509 176 aa13.99□□□□□ -0.17
PHRF1-206ENST00000534320 TSKUQ8WUA8 353 aa13.99□□□□□ -0.17
PHRF1-206ENST00000534320 USF3Q68DE3 2245 aa13.99□□□□□ -0.17
PHRF1-206ENST00000534320 CFHR2P36980 270 aa13.99□□□□□ -0.17
PHRF1-206ENST00000534320 LINC01551Q86U37 167 aa13.99□□□□□ -0.17
PHRF1-206ENST00000534320 SPANXDQ9BXN6 97 aa13.99□□□□□ -0.17
PHRF1-206ENST00000534320 ACTL10Q5JWF8 245 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 SPSB3Q6PJ21 355 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 DUX4L9Q6RFH8 374 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-206ENST00000534320 C2orf82Q6UX34 121 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 TECTAO75443 2155 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 A0A087X0K7 114 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 RASL11AQ6T310 242 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 IFI27P40305 119 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-206ENST00000534320 C3orf79P0CE67 100 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 C17orf58Q2M2W7 97 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 IGFL2Q6UWQ7 119 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 C20orf144Q9BQM9 153 aa13.98□□□□□ -0.17
PHRF1-206ENST00000534320 KLF12Q9Y4X4 402 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 SSC4DQ8WTU2 575 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 LINC00527Q9UJ94 153 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 CACNA1BQ00975 2339 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 TMEM238C9JI98 176 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 FNDC10F2Z333 226 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 PSG3Q16557 428 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 KLF17Q5JT82 389 aaPredicted RBP13.97□□□□□ -0.17
PHRF1-206ENST00000534320 SLC25A39Q9BZJ4 359 aaPredicted RBP13.97□□□□□ -0.17
PHRF1-206ENST00000534320 TOMM7Q9P0U1 55 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 FABP5P3A8MUU1 101 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 TMEM256Q8N2U0 113 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 SCRT1Q9BWW7 348 aa13.97□□□□□ -0.17
PHRF1-206ENST00000534320 TRAV41A0A0B4J266 112 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 GAGE1Q13065 139 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 MLANAQ16655 118 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 C15orf32Q32M92 178 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 C15orf65H3BRN8 121 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 DSCR9P59020 149 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 KRTAP27-1Q3LI81 207 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 SPRY4Q9C004 299 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 PMS2P5A8MQ11 134 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 Q6ZSR3 168 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 LYPD6Q86Y78 171 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 ATP6V0BQ99437 205 aa13.96□□□□□ -0.17
PHRF1-206ENST00000534320 TMEM219Q86XT9 240 aa13.96□□□□□ -0.18
PHRF1-206ENST00000534320 TMEM14BQ9NUH8 114 aa13.96□□□□□ -0.18
PHRF1-206ENST00000534320 A0A1W2PNU3 283 aaPredicted RBP13.95□□□□□ -0.18
PHRF1-206ENST00000534320 ASCL2Q99929 193 aa13.95□□□□□ -0.18
PHRF1-206ENST00000534320 TEX36Q5VZQ5 186 aa13.95□□□□□ -0.18
PHRF1-206ENST00000534320 PRSS22Q9GZN4 317 aa13.95□□□□□ -0.18
PHRF1-206ENST00000534320 SELENOKQ9Y6D0 94 aa13.95□□□□□ -0.18
PHRF1-206ENST00000534320 MRPL27Q9P0M9 148 aaKnown RBP13.95□□□□□ -0.18
PHRF1-206ENST00000534320 C9JQL5 133 aa13.94□□□□□ -0.18
PHRF1-206ENST00000534320 SNHG12Q9BXW3 62 aa13.94□□□□□ -0.18
PHRF1-206ENST00000534320 PAX8Q06710 450 aa13.94□□□□□ -0.18
PHRF1-206ENST00000534320 PHLDA1Q8WV24 401 aaPredicted RBP13.94□□□□□ -0.18
PHRF1-206ENST00000534320 YLPM1P49750 1951 aaKnown RBP13.94□□□□□ -0.18
PHRF1-206ENST00000534320 hDV102S1A0JD36 115 aa13.94□□□□□ -0.18
PHRF1-206ENST00000534320 BPESC1Q9GZL8 116 aa13.94□□□□□ -0.18
PHRF1-206ENST00000534320 FGF23Q9GZV9 251 aaPredicted RBP13.94□□□□□ -0.18
PHRF1-206ENST00000534320 GTF3C1Q12789 2109 aa13.94□□□□□ -0.18
PHRF1-206ENST00000534320 FAM90A2PQ658T7 463 aa13.94□□□□□ -0.18
PHRF1-206ENST00000534320 IGHV2-70P01814 119 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 TCF15Q12870 199 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 IGF2-ASQ6U949 168 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 A0A1W2PPI3 338 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 PAX1P15863 534 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 ZNF833PQ6ZTB9 187 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 EXOC3-AS1Q8N2X6 119 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 LOXP28300 417 aaPredicted RBP13.93□□□□□ -0.18
PHRF1-206ENST00000534320 RNASE4P34096 147 aaKnown RBP13.93□□□□□ -0.18
PHRF1-206ENST00000534320 GTSCR1Q86UQ5 136 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 DOCK10Q96BY6 2186 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 IL15RAQ13261 267 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 LCN12Q6JVE5 192 aa13.93□□□□□ -0.18
PHRF1-206ENST00000534320 K7EM74 188 aa13.92□□□□□ -0.18
PHRF1-206ENST00000534320 BRD3OSQ6XYD6 125 aa13.92□□□□□ -0.18
PHRF1-206ENST00000534320 SYS1-DBNDD2H3BUS1 97 aa13.92□□□□□ -0.18
PHRF1-206ENST00000534320 NPSP0C0P6 89 aa13.92□□□□□ -0.18
PHRF1-206ENST00000534320 CD300EQ496F6 205 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-206ENST00000534320 VDAC2P45880 294 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-206ENST00000534320 ZNF134P52741 427 aa13.92□□□□□ -0.18
PHRF1-206ENST00000534320 B4DSR2 109 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 TCRAP04437 139 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 RPL15P61313 204 aaKnown RBP13.91□□□□□ -0.18
PHRF1-206ENST00000534320 CFAP161Q6P656 301 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 MORN3Q6PF18 240 aaPredicted RBP13.91□□□□□ -0.18
PHRF1-206ENST00000534320 C11orf53Q8IXP5 236 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 SPANXCQ9NY87 97 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 ABCA4P78363 2273 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 TMEM190Q8WZ59 177 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 PRO3102Q9H379 93 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 LY96Q9Y6Y9 160 aa13.91□□□□□ -0.18
PHRF1-206ENST00000534320 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
PHRF1-206ENST00000534320 TSSC4Q9Y5U2 329 aaPredicted RBP13.91□□□□□ -0.18
PHRF1-206ENST00000534320 NDUFA4L2Q9NRX3 87 aa13.9□□□□□ -0.18
PHRF1-206ENST00000534320 WNK2Q9Y3S1 2297 aa13.9□□□□□ -0.18
PHRF1-206ENST00000534320 SRSF8Q9BRL6 282 aaKnown RBP13.9□□□□□ -0.18
PHRF1-206ENST00000534320 H3BUX3 64 aa13.9□□□□□ -0.18
PHRF1-206ENST00000534320 MMP23AO75900 390 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms