RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 ZNF253O75346 499 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 CXCL3P19876 107 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 NANOS2P60321 138 aaKnown RBP11.18□□□□□ -0.62
UBXN1-217ENST00000534176 OPCMLQ14982 345 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 PSG3Q16557 428 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 TMEM37Q8WXS4 190 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 LINC00476Q8WZB0 136 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 IGF2BP2-AS1Q96M15 143 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 SLC39A9Q9NUM3 307 aa11.18□□□□□ -0.62
UBXN1-217ENST00000534176 TRAV10A0A0B4J240 114 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 C17orf112F2Z3M2 114 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
UBXN1-217ENST00000534176 PTTG1O95997 202 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 HBE1P02100 147 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 RBMY1A1P0DJD3 496 aaKnown RBP11.17□□□□□ -0.62
UBXN1-217ENST00000534176 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 FGF7P21781 194 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
UBXN1-217ENST00000534176 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
UBXN1-217ENST00000534176 OR5C1Q8NGR4 320 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 C17orf77Q96MU5 243 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 ZNF331Q9NQX6 463 aaPredicted RBP11.17□□□□□ -0.62
UBXN1-217ENST00000534176 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
UBXN1-217ENST00000534176 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 INSP01308 110 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 PDE6HQ13956 83 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 MIC13Q5XKP0 118 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 TMEM256Q8N2U0 113 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 OR8A1Q8NGG7 326 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 PPP1R1CQ8WVI7 109 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 LYSTQ99698 3801 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 TMEM208Q9BTX3 173 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
UBXN1-217ENST00000534176 DYNC2H1Q8NCM8 4307 aaKnown RBP11.15□□□□□ -0.62
UBXN1-217ENST00000534176 F6UB75 175 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 DEFB4AO15263 64 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 H2BFSP57053 126 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 RRN3P1Q2M238 152 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 LRRC37A5PQ49AS3 106 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 AMTNQ6UX39 209 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 OR11H7Q8NGC8 314 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 ASB13Q8WXK3 278 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 RPUSD4Q96CM3 377 aaKnown RBP11.15□□□□□ -0.62
UBXN1-217ENST00000534176 MRPL53Q96EL3 112 aaKnown RBP11.15□□□□□ -0.62
UBXN1-217ENST00000534176 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.62
UBXN1-217ENST00000534176 BOLA2-SMG1P6H3BVE0 249 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 SIX6O95475 246 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 MPC2O95563 127 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 IGLC2P0DOY2 106 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 TSPOP30536 169 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 RNF182Q8N6D2 247 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
UBXN1-217ENST00000534176 RYR3Q15413 4870 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 LY6G6CO95867 125 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 RHOBP62745 196 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 HIST1H1AQ02539 215 aaPredicted RBP11.13□□□□□ -0.63
UBXN1-217ENST00000534176 NHLH2Q02577 135 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 OXA1LQ15070 435 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 FAM210BQ96KR6 192 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 ATP5SQ99766 215 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 RNF126Q9BV68 326 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 MRPL32Q9BYC8 188 aaKnown RBP11.13□□□□□ -0.63
UBXN1-217ENST00000534176 OR5AC2Q9NZP5 309 aa11.13□□□□□ -0.63
UBXN1-217ENST00000534176 IFNA5P01569 189 aa11.12□□□□□ -0.63
UBXN1-217ENST00000534176 HIST1H1EP10412 219 aaKnown RBP11.12□□□□□ -0.63
UBXN1-217ENST00000534176 CDKN1BP46527 198 aa11.12□□□□□ -0.63
UBXN1-217ENST00000534176 FXYD7P58549 80 aa11.12□□□□□ -0.63
UBXN1-217ENST00000534176 DEFB1P60022 68 aa11.12□□□□□ -0.63
UBXN1-217ENST00000534176 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
UBXN1-217ENST00000534176 ODF3Q96PU9 254 aa11.12□□□□□ -0.63
UBXN1-217ENST00000534176 WDR61Q9GZS3 305 aaKnown RBP11.12□□□□□ -0.63
UBXN1-217ENST00000534176 LOC102723971A0A1B0GUV8 181 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 Q6ZTC4 211 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 THAP6Q8TBB0 222 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 SCGB1C1Q8TD33 95 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
UBXN1-217ENST00000534176 AAMDCQ9H7C9 122 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 HSPB11Q9Y547 144 aa11.11□□□□□ -0.63
UBXN1-217ENST00000534176 TRBV19A0A075B6N1 114 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 DEFB131BA0A096LNP1 70 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 LYRM9A8MSI8 78 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 IGLL5B9A064 214 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 H0YIZ8 118 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 RPL12P30050 165 aaKnown RBP11.1□□□□□ -0.63
UBXN1-217ENST00000534176 CLINT1Q14677 625 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 IGFL4Q6B9Z1 124 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 NIPSNAP3BQ9BS92 247 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
UBXN1-217ENST00000534176 TIMM9Q9Y5J7 89 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms